Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02046 ATGTCTGATGCTTTGATCAATGGATTGTCTGGAGCTGGAGGAGGAATCATCGCTCAGCTCATCACATATCCCCTTCAAACTGTTAATACTCGTCAACAGACAGAGCGTGATCCGAAGAAGACGAGGAGGAGACTTGGAACCATAGAACAAATGTGTCAGGTCGTCGAGCAAGAAGGGTGGGGACGTCTTTACGGAGGCCTGACGCCGTCGTTGGTGGGTACCGCTGCATCGCAGGGTGTTTACTACTATTTCTATCAAGTATTTAGGAACAAGGCGGAAGCTGCTGCACTTGATCGGTGGAAGAAAGGGAGTGGTGATGGATCAGTCGGAATGTTCTCATCACTTGTGGTGGCTGCGTTGTCTGGGTGTGTGAATGTGCTGTTGACTAACCCTATATGGGTAGTTGTTACCCGTATGCAGACGCATACAAAAGCATCAACAAAAGCCAAACCTAGTCATAGTCCATCGATTGCTCCAGATGAAGCAATTCAAATTGCTGCAATCGAGCCTCCTCCCTATGGAACTAGCCTTGCGGTCCAAGAAGTTTTTGGTGAAGCTGGAGTTCAGGGTTTCTGGAAAGGCGTATTCCCAACACTTATCATGGTTAGCAATCCTTCCATACAGTTCATGCTGTATGAAACCTTGTTGAAGAAGCTGAAGGCAAGACGTGCCTTGACTAAGAAAGGAAACAATGGGGTAACTGCTTTAGAGGTTTTTCTTCTTGGAGCTGTGGCTAAACTTGGAGCTACCGTGGTGACGTATCCCCTTCTTGTTGTGAAGTCAAGGCTTCAAGCAAAACAAGTGACTGGTGGTGACAAAATGCTTCATTATAAAGGTACGCTTGATGCAATCATGAAGATGATCCAATATGAAGGAGTCTCCGGATTTTACAAAGGGATGAGCACAAAAATCGTGCAGAGTGTGCTCGCTGCTGCCGTCTTGTTTATGGTCAAGGAAGAACTAGTCAAGGGGGTTCGCTTGCTGGTGACTCGGGATGCCAGCCTGATTAATAAGGCAAGAAAGCCACCATGA 1032 0.47 MSDALINGLSGAGGGIIAQLITYPLQTVNTRQQTERDPKKTRRRLGTIEQMCQVVEQEGWGRLYGGLTPSLVGTAASQGVYYYFYQVFRNKAEAAALDRWKKGSGDGSVGMFSSLVVAALSGCVNVLLTNPIWVVVTRMQTHTKASTKAKPSHSPSIAPDEAIQIAAIEPPPYGTSLAVQEVFGEAGVQGFWKGVFPTLIMVSNPSIQFMLYETLLKKLKARRALTKKGNNGVTALEVFLLGAVAKLGATVVTYPLLVVKSRLQAKQVTGGDKMLHYKGTLDAIMKMIQYEGVSGFYKGMSTKIVQSVLAAAVLFMVKEELVKGVRLLVTRDASLINKARKPP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02046 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Eupl05g02046 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 218 IPR018108 -
Eupl05g02046 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 324 IPR018108 -
Eupl05g02046 343 SUPERFAMILY Mitochondrial carrier 3 320 IPR023395 -
Eupl05g02046 343 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 330 IPR044712 GO:0006862|GO:0055085
Eupl05g02046 343 Pfam Mitochondrial carrier protein 109 220 IPR018108 -
Eupl05g02046 343 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Eupl05g02046 343 Pfam Mitochondrial carrier protein 234 322 IPR018108 -
Eupl05g02046 343 Gene3D Mitochondrial carrier domain 5 329 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02046 Eupl-Chr5 46363533 46372475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02046 24 341 Chloroplast and Mitochondria Gene Families AT1G25380 25.538 2.21e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02046 K13354 - nnu:104601219 569.696