Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02035 ATGATGAAGTGGGGTAAGGAAATACTCCATCCGTCGTATCCTCCCAACTCGAATTGGTTGCTTGAAGACAGCAAGAGCCCGAAATGGACCCATGAGGAGAACAAGTTGTTTGAGAATGCTCTTGCAATCTACGATAGGGACACTCCCGATCGATGGCAGAAGGTGGCGGACATGATCCCAGGCAAGACCGTGAGGGACGTGATGAATCAGTATGAAGTATTGTTAGCTGATGTTAGCGACATAGAAGCAGGGCTGGTTCCAGATCCTGGTTACACCACCTCCTCTTTCACATTGGAGTGGGCGAACAATCGTGCGTTTGATGGGTTGAAACAATCTTTCGACTCTGCTGGAAAGAGATCTTGCTCGGGCAGGCCTTCTGATCAGGAACGGAAGAAAGGGGTCCCATGGTCAGAAGATGAGCACAGGTTGTTTCTGATGGGTCTTAAAAAGTATGGTAAAGGAGACTGGAGAAATATCTCCAGGAATTTTGTAATCTCTAGGACCCCAACTCAAGTGGCTAGCCATGCTCAGAAGTACTTTATCAGGCAGCTTTCGGGAGGGAAAGATAAGAGGAGATCCAGCATCCATGATATAACAACTGTCAATCTCACAGACAATAGAACGCCTTCCCCAGAAAATAACAGACCTCCTTCTCTGGATCATTCTACAGTGCTTCCTCAGCAGCCTAATCCGAGTGGCACACCCAAAGCACTAAGTGATTGGAATCAGCCTCAAGACAGAACAACCATGGTTTTCAGCCCAGCACATGGGAACATGTTTGTGCCACCTCCTTATGGGATAACTTCGTATGGGATGAAACTACAGGGGCAAAATCTGCATAGAGGTGCTCTTCATGGATCTCATATGGGACCCCACGGTACAGTGTTTCAGATGCAATCCTCACAATGCTACCCTCATGGATAA 924 0.4751 MMKWGKEILHPSYPPNSNWLLEDSKSPKWTHEENKLFENALAIYDRDTPDRWQKVADMIPGKTVRDVMNQYEVLLADVSDIEAGLVPDPGYTTSSFTLEWANNRAFDGLKQSFDSAGKRSCSGRPSDQERKKGVPWSEDEHRLFLMGLKKYGKGDWRNISRNFVISRTPTQVASHAQKYFIRQLSGGKDKRRSSIHDITTVNLTDNRTPSPENNRPPSLDHSTVLPQQPNPSGTPKALSDWNQPQDRTTMVFSPAHGNMFVPPPYGITSYGMKLQGQNLHRGALHGSHMGPHGTVFQMQSSQCYPHG* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02035 307 MobiDBLite consensus disorder prediction 197 242 - -
Eupl05g02035 307 MobiDBLite consensus disorder prediction 114 135 - -
Eupl05g02035 307 FunFam transcription factor MYB1R1 134 185 - -
Eupl05g02035 307 FunFam Transcription factor SRM1 21 88 - -
Eupl05g02035 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Eupl05g02035 307 ProSiteProfiles Myb-like domain profile. 21 75 IPR001005 -
Eupl05g02035 307 Gene3D - 134 184 - -
Eupl05g02035 307 CDD SANT 135 180 IPR001005 -
Eupl05g02035 307 SUPERFAMILY Homeodomain-like 27 81 IPR009057 -
Eupl05g02035 307 ProSiteProfiles SANT domain profile. 24 71 IPR017884 -
Eupl05g02035 307 MobiDBLite consensus disorder prediction 184 242 - -
Eupl05g02035 307 Gene3D - 22 87 - -
Eupl05g02035 307 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Eupl05g02035 307 SMART sant 132 182 IPR001005 -
Eupl05g02035 307 SMART sant 25 77 IPR001005 -
Eupl05g02035 307 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Eupl05g02035 307 Pfam Myb-like DNA-binding domain 28 74 IPR001005 -
Eupl05g02035 307 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 261 IPR043363 -
Eupl05g02035 307 CDD SANT 28 75 IPR001005 -
Eupl05g02035 307 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Eupl05g02035 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Eupl05g02035 307 SUPERFAMILY Homeodomain-like 130 183 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02035 Eupl-Chr5 46242913 46245931 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl05g02035 Myb_DNA-binding 5.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02035 - - psom:113310121 462.611