Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02019 ATGGACTTAAATGCATCGCCATTACCTGAAGAAGATGAAGAAGCAATCTTTCAAGGACACGTTGAAGAAGAAACTGCAGCAGAAGAGCATATAGAGACTGCAGTTCAGACGCTGCGCAGAGAGCGTGAAGAAAGGCGTCAGCGATTGAAAAGAGAATACCCATATGAGGGGACAAAGCAGAGTATACCGCTACCGAAGAAAGATCCAGTGGTTCAGTTTAGAAACTCTAGATCTTATGAAAGAAACAGGCTTCCCCCTGGTTGGTTGGATTGTCCTGCATATGGTCAGGGCATAGGTTACATAATCCCTTCTAAAGTTCCTCTAGGTGAATCTTTCAATGATTTGGTTGTTCCTGGTAAAAGATACTCTTTGAGACAAGTGATTCATCAACAAAGAATGTTAGAAAGGGATCTTGGTTTAGTGATTGATCTGACAAACACTACTCGCTACTATCAAGTGGCAGATTTGAAGAAACAAGGTATTAAGTATGTAAAGATTGCATGCAAGGGAAGGGATTCTGTACCTGATAATGAGTCCGTAAATAACTTTATCTATGAGGTCTTACAGTTCTTCGCTCGCCAGAAACACTCAAAGAAGTATATTCTTGTCCATTGTACTCATGGGCATAATCGCACAGGTTATATGATTATTCATTTTCTTATGCGTTCACAATCACTTTCTGTCACTGAGGCGCTACAAATATTTGCTAATGCACGCCCTCCAGGAATATATAAAGAAGACTATATTGATGCATTATACACATTTTATCATGAAAGAAAACCTGAAGCAGTGATTTGCCCTTCAACTCCTGAGTGGAAAAGATCTTCTGTTCTTGACCTTAATGGTGAAGTTGTGCCAGATGAGGATGATGATGGTGGTGTTGCCGCTCCTTTGCATGTGGCTCATGTGCAAAATGAAGTAATGACAAATGATGATGTTTTGGGAGATGCAATACCTTATGACCAGCAAGATGTGATGCGACAATTCTGCTATCATTCACTTAAATTGGGTACAGGGGCAAGAGGAGTCTCTCAATTTCCAGGATCACACCCAGTTTCTCTCAACAGGGAAAACTTACAACTGTTGAGGCAGCGTTATTACTATGCCACATGGAAAGCTGATGGAACGCGATATATGATGCTTATAACTTGTGACGGGTGTTACTTGATTGATAGAAATTTTTGTTTTCGAAGAGTCCAGATGCGGTTTCCCTCAAAACAAACAAATGAGGGTCTAGCTAAAGAGACTCACAACTTAACATTACTTGATGGTGAGATGGTGATTGACACTCTGCCAGATACCCGGAAGCAGGAGAGAAGATATCTGATTTACGATCTGATGGCAATTAACCAAGTTTCGGTCGTAGAGTTGCCCTTCCATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTCGAAATCTTGAACGTCACTATATTTACCAGAGTAGAAATCCTTATTACAGATATGACATGGAACCGTTCCGAGTGAGGAGGAAGGATTTTTGGTTACTATCTACTGTTACCAAGCTTCTAAAGGAATTCATTCCGAAGCTTTCACATGAAGCAGATGGTCTTATTTTTCAGGGTTGGGACGATCCTTATGTGCCCCGTACCCATGAAGGCCTCTTAAAGTGGAAATATCCTGAATTGAACTCAGTCGATTTTCTATTTGAGGTGGAAGAAGAAAATTGTCAGCTACTTTGTCTTTATGAACGAGGAAAAAAGAAGCTAATGGAAGGGAATCGGGTTGTGTTTAAAAGTGCATCAGATCCATCAACGTATTCAGGAAAGATCATAGAGTGTTCTTGGGATTCTGAGGAAAAGGTCTGGGTGTGCATGCGCATCAGGACAGACAAGTCAACCCCAAATGATATCAATACCTACAGGAAGGTGATGCGGAGCATAAAGGATAATATAACGGAGGATGTCTTATTGAACGAGATTGGTGAGATTGTTCGCCTGCCCATGTATGCTGATAGGATACGGAGTGATAGTAAAGCCCGCACGCACCACCAGAATTCAGGGCGTCGGAGGTGA 2043 0.4151 MDLNASPLPEEDEEAIFQGHVEEETAAEEHIETAVQTLRREREERRQRLKREYPYEGTKQSIPLPKKDPVVQFRNSRSYERNRLPPGWLDCPAYGQGIGYIIPSKVPLGESFNDLVVPGKRYSLRQVIHQQRMLERDLGLVIDLTNTTRYYQVADLKKQGIKYVKIACKGRDSVPDNESVNNFIYEVLQFFARQKHSKKYILVHCTHGHNRTGYMIIHFLMRSQSLSVTEALQIFANARPPGIYKEDYIDALYTFYHERKPEAVICPSTPEWKRSSVLDLNGEVVPDEDDDGGVAAPLHVAHVQNEVMTNDDVLGDAIPYDQQDVMRQFCYHSLKLGTGARGVSQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITCDGCYLIDRNFCFRRVQMRFPSKQTNEGLAKETHNLTLLDGEMVIDTLPDTRKQERRYLIYDLMAINQVSVVELPFHERWKMLEKEVIEPRNLERHYIYQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLKEFIPKLSHEADGLIFQGWDDPYVPRTHEGLLKWKYPELNSVDFLFEVEEENCQLLCLYERGKKKLMEGNRVVFKSASDPSTYSGKIIECSWDSEEKVWVCMRIRTDKSTPNDINTYRKVMRSIKDNITEDVLLNEIGEIVRLPMYADRIRSDSKARTHHQNSGRRR* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02019 680 SMART dsp_5 110 258 IPR020422 GO:0006470|GO:0008138
Eupl05g02019 680 CDD Adenylation_mRNA_capping 341 549 IPR001339 GO:0004484|GO:0005524|GO:0006370
Eupl05g02019 680 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 181 250 IPR000387 GO:0016311|GO:0016791
Eupl05g02019 680 Gene3D - 547 656 IPR012340 -
Eupl05g02019 680 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 311 549 - -
Eupl05g02019 680 Pfam Dual specificity phosphatase, catalytic domain 131 256 IPR000340 GO:0008138|GO:0016311
Eupl05g02019 680 Pfam mRNA capping enzyme, C-terminal domain 552 647 IPR013846 -
Eupl05g02019 680 Gene3D Protein tyrosine phosphatase superfamily 80 292 IPR029021 -
Eupl05g02019 680 FunFam mRNA capping enzyme, putative 309 546 - -
Eupl05g02019 680 CDD RNA_5'-triphosphatase 87 253 - -
Eupl05g02019 680 ProSiteProfiles Dual specificity protein phosphatase domain profile. 106 262 IPR020422 GO:0006470|GO:0008138
Eupl05g02019 680 FunFam mRNA capping enzyme family protein 547 656 - -
Eupl05g02019 680 Pfam mRNA capping enzyme, catalytic domain 350 548 IPR001339 GO:0004484|GO:0005524|GO:0006370
Eupl05g02019 680 PIRSF mRNA_capping_HCE 70 680 IPR017074 GO:0004484|GO:0006370|GO:0140818
Eupl05g02019 680 Gene3D DNA ligase/mRNA capping enzyme 300 546 - -
Eupl05g02019 680 SUPERFAMILY Nucleic acid-binding proteins 551 664 IPR012340 -
Eupl05g02019 680 PANTHER MRNA-CAPPING ENZYME 79 661 - -
Eupl05g02019 680 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 84 273 IPR029021 -
Eupl05g02019 680 FunFam mRNA capping enzyme family protein 80 294 - -
Eupl05g02019 680 ProSitePatterns Tyrosine specific protein phosphatases active site. 203 213 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02019 Eupl-Chr5 45947523 45997167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02019 1 669 Protein tyrosine phosphatase (PTP) family AT3G09100 68.843 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02019 K13917 - nnu:104597018 1110.52