Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g02000 ATGGTGAAGGGACGCCAGGGAGAGCGCGTCAGACTCTATGTGAGGGGGACGATTCTTGGATACAAAAGGTCAAAATCCAACCAGTACCCAAACACGTCGTTGATCCAGATCGAAGGCGTGAATACCAAGGAGGAGGTCGCATGGTACTGCGGCAAGCGCATGGCTTACATTTACAAGGCTAAGGTCAAGAAGGACGGATCCCATTACCGATGCATCTGGGGAAAGGTCGCCCGGCCGCACGGTAACAGCGGAGTCGTTCGAGCCAAGTTCAAGTCCAACCTACCCCCCAAATCCATGGGTCTTGTCGAACTGTCCCAATTCTTGCTTAGTACTCTTGTTGGATATTCGCAGAAAATGCATAAACTTGTGTCAGGATGGGAAGAAAGGAAGATGTGCTCCCAGCCCGTGTTCTACATAGCATGCATGCCAGGGTGCTGGGACCAACCACCTGATGCATTCCACCAAGGAGAATTTCTAGACCAAGTCATTGGACATTGA 498 0.512 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAKVKKDGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGLVELSQFLLSTLVGYSQKMHKLVSGWEERKMCSQPVFYIACMPGCWDQPPDAFHQGEFLDQVIGH* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g02000 165 FunFam 60S ribosomal protein L35a 7 110 - -
Eupl05g02000 165 SUPERFAMILY Translation proteins 12 100 IPR009000 -
Eupl05g02000 165 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 100 IPR001780 GO:0003735|GO:0005840|GO:0006412
Eupl05g02000 165 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Eupl05g02000 165 Gene3D translation elongation factor selb, chain A, domain 4 6 104 IPR038661 -
Eupl05g02000 165 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Eupl05g02000 165 Pfam Ribosomal protein L35Ae 12 100 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g02000 Eupl-Chr5 45581514 45583415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g02000 1 100 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 92.000 5.91e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g02000 K02917 - vvi:100242662 207.994