Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01992 ATGGTTAAGCCCGCCTCCGTCCGATCGTGTCGCTTCCGCATCCAAGGGATGACATGCACTGCATGCTCCACCGCCATCGAATCCACCATCCAAAAGATCAATGGTGTCCGAAGCGCTGTTGTTGCCTTAGCGACCGAAGTAGCTGAAATCGAATTCGATCCTGACCTAGTCACCCTAACGCAATTAATCCAAGCCATTGACGACATGGGTTTTGGAGCCTCCATTATATCCACCGGCGAAAACACCACCAATCTCTACCTCAAACTCGAAAATTCCATCGAAGAAGAGTTTCTTCAAACCTCGATTGCAACATTACAAGGTATCGAAGCCGTTGAATTAGACCCATCTCTTAAAACCTTAACTATTTCCTACTCATCGGATCTTATCGGACCCAGAAAGATAATCTCAGTCCTCGAATCAAAAGGATTCAAAACATCACTTATCGACGAGAGAGAAAAAGATGCTAAATTGAAGCACGCGGATATCAAGAGCTACTACCATAGCTTCCTCTGGAGCCTCATCTTCACCATTCCAGTGTTCTTGACGTCCATGGTCTTCTCGTACATTCCGTCATTTAAAGCTGGGTTTCTTGACAAAAGGGTAGCTAACATGCTTACATTGGGAGAACTCTTCAGGGGTGTAATGTCCACCCCAGTACAATTTATAATCGGCCGAAGATTCTACATAGGAGCTTATAAGGCCATGAAGCTAAGGTGCGCCAACATGGACTGCTTAGTCATGGTTGGTACAAATGCCGCGTATTTCTACTCAGTCTACGTTGTTATACGATCTTCGATGTCGAGAGATTTTGATAACGAGGATTTCTTCGAAACGACTACGATGTTAATCTCGTTCATTCTCCTCGGCAAGTATTTGGTTGCACTGGCCAAGGGAAAGACGAGCGATGCGATATCAAAGCTCATGAAGCTCGCTCCGGAGACAGCGAGGTTGGCAATTTTCGATGAAGAGGGGAGATTAATCAGCGAGGAGATGATTGATCGGCGATTGATTGAGAAGGAAGACGTAGTAAAGGTTTTACCAGGAGAGAGGGTTAGTGTGGATGGAGTTGTGGTGATGGGAGAGAGTCACGTGGACGAGAGTATGGTCACCGGAGAGTCAAGGTGGGTCCATAAAATAACTGGTGATGAGGTGATTGGAGGGACGGTGAACGGATCAGGTGTGTTACAGGTGAGAGTGACATGTGTTGGGTCAGATACTGCGGTTGCTCGGATAATACAACTTGTCGAAGGGGCTCAGATGGGAAAGGCACCAGTGCAGAAGCTAGCCGACCGGATATCAAAGTATTTCGTACCATTAGTGGTTGGCAGTGGTCTAGTGACATGGTTGGGCTGGTACATAGCGGGGACTCTACAAATATATCCAACGGAGTGGGTACCACCGTACATGGACAGATTCGAGCTGGCCCTTCAGTTTGGGATATCGGTGGTGGTGGTAGCTTGCCCCTGCGCCTTGGGATTGGCCACTCCAACGGCTGTGATGGTGGGCACCGGTGTCGGTGCTTCTCAGGGCGTCCTCCTCAAAGGTGGCGAAGCACTTGAGAATGCACACAAGGTGAATTGCGTGGTGTTTGACAAGACAGGGACGTTAACCGCTGGAAAGCCCACTGTTGTGAGTACGAGGCTGCTTATGGACGTGCCTCTTCCTGATTTTTACCAACTGGTTGCTGCAACTGAGGTTAACAGCGAGCACCCACTAGGGAAGGCCATAGTAGAACATGCAAAGAACCATGTACAAACTCAGGGTTGGCCAGAGGCCCGTGACTTCGAGTCCATCACGGGTCATGGAGTCAAGGCCGCAATCCACGACAGATGTGTTATCATAGGAAACAAGGGTCTCATGCAAAGATTTGGCATTCAAATTCCGAGAGTTGCTTTTGATTACTTGGAGGAGGCCCAGCGCCTGGGGCAGACTGCAGTCCTTGTCGCCATCGACAGAGATGTCGTGGGAGTGATCGCAGTCTCGGATCCAGTGAAGGCAGAGGCATACAGAATCATCTCCATCTTAAGGAGAATGGGCGTGACCGGGTTGATGGTGACCGGAGACAGCACAGTGACAGCAAATGCAGTTGCCAAGGAGGTGGGTCTCGATTTCGTCGTCGCTGAAGCAAAACCTGAAGATAAAGCCCAAAAAATAAGAGAATTGCAGAGGGATGGATTCACGGTGGCAATGGTGGGGGATGGGATTAACGACTCACCAGCATTGGCTGTTGCTGATGTTGGAATGGCCATTGGGGCTGGCTCTGACATTGCTATTGAAGTTGCTAATGTTGTTTTGATGAGGAGCGACCTGGAAGGTGTGGTCACTGCTATCGACCTATCAACAAAGACATTCAACAGGATCCGGTTGAACTACGTGTGGGCTCTGGCTTACAATGTTATGGCGATACCCATTGCTGCTGGGGCCTTGTTCCCCTTTACCAGATTCCGGCTGCCACCATGGGTTGCTGGCGCTGCCATGGGTGCTTCTTCAGTAAGTGTTGTTTGTTCCTCACTCTTGCTTAAGTATTACAGAAGGCCCCGAGAGCTCGACTTGCTTCAATTCCATGGAGTTGAAGTCCAATAG 2583 0.4921 MVKPASVRSCRFRIQGMTCTACSTAIESTIQKINGVRSAVVALATEVAEIEFDPDLVTLTQLIQAIDDMGFGASIISTGENTTNLYLKLENSIEEEFLQTSIATLQGIEAVELDPSLKTLTISYSSDLIGPRKIISVLESKGFKTSLIDEREKDAKLKHADIKSYYHSFLWSLIFTIPVFLTSMVFSYIPSFKAGFLDKRVANMLTLGELFRGVMSTPVQFIIGRRFYIGAYKAMKLRCANMDCLVMVGTNAAYFYSVYVVIRSSMSRDFDNEDFFETTTMLISFILLGKYLVALAKGKTSDAISKLMKLAPETARLAIFDEEGRLISEEMIDRRLIEKEDVVKVLPGERVSVDGVVVMGESHVDESMVTGESRWVHKITGDEVIGGTVNGSGVLQVRVTCVGSDTAVARIIQLVEGAQMGKAPVQKLADRISKYFVPLVVGSGLVTWLGWYIAGTLQIYPTEWVPPYMDRFELALQFGISVVVVACPCALGLATPTAVMVGTGVGASQGVLLKGGEALENAHKVNCVVFDKTGTLTAGKPTVVSTRLLMDVPLPDFYQLVAATEVNSEHPLGKAIVEHAKNHVQTQGWPEARDFESITGHGVKAAIHDRCVIIGNKGLMQRFGIQIPRVAFDYLEEAQRLGQTAVLVAIDRDVVGVIAVSDPVKAEAYRIISILRRMGVTGLMVTGDSTVTANAVAKEVGLDFVVAEAKPEDKAQKIRELQRDGFTVAMVGDGINDSPALAVADVGMAIGAGSDIAIEVANVVLMRSDLEGVVTAIDLSTKTFNRIRLNYVWALAYNVMAIPIAAGALFPFTRFRLPPWVAGAAMGASSVSVVCSSLLLKYYRRPRELDLLQFHGVEVQ* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01992 860 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 6 856 - -
Eupl05g01992 860 Pfam E1-E2 ATPase 312 507 - -
Eupl05g01992 860 FunFam ATPase copper transporting beta 5 78 - -
Eupl05g01992 860 SUPERFAMILY HAD-like 528 837 IPR036412 -
Eupl05g01992 860 CDD HMA 12 74 IPR006121 GO:0046872
Eupl05g01992 860 CDD P-type_ATPase_Cu-like 167 826 - -
Eupl05g01992 860 SUPERFAMILY Calcium ATPase, transduction domain A 331 415 IPR008250 -
Eupl05g01992 860 NCBIfam heavy metal translocating P-type ATPase 242 840 IPR027256 GO:0006812|GO:0016020|GO:0019829
Eupl05g01992 860 PRINTS Copper-transporting ATPase 1 signature 225 250 - -
Eupl05g01992 860 PRINTS Copper-transporting ATPase 1 signature 64 84 - -
Eupl05g01992 860 PRINTS Copper-transporting ATPase 1 signature 169 190 - -
Eupl05g01992 860 PRINTS Copper-transporting ATPase 1 signature 9 34 - -
Eupl05g01992 860 PRINTS Copper-transporting ATPase 1 signature 205 225 - -
Eupl05g01992 860 PRINTS Copper-transporting ATPase 1 signature 35 58 - -
Eupl05g01992 860 NCBIfam HAD-IC family P-type ATPase 282 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g01992 860 PRINTS P-type cation-transporting ATPase superfamily signature 529 543 - -
Eupl05g01992 860 PRINTS P-type cation-transporting ATPase superfamily signature 678 688 - -
Eupl05g01992 860 PRINTS P-type cation-transporting ATPase superfamily signature 754 766 - -
Eupl05g01992 860 PRINTS P-type cation-transporting ATPase superfamily signature 656 667 - -
Eupl05g01992 860 PRINTS P-type cation-transporting ATPase superfamily signature 365 379 - -
Eupl05g01992 860 PRINTS P-type cation-transporting ATPase superfamily signature 731 750 - -
Eupl05g01992 860 SFLD p-type atpase 511 782 IPR044492 -
Eupl05g01992 860 SFLD Haloacid Dehalogenase 511 782 - -
Eupl05g01992 860 SUPERFAMILY HMA, heavy metal-associated domain 5 79 IPR036163 GO:0046872
Eupl05g01992 860 Gene3D - 8 80 - -
Eupl05g01992 860 Gene3D - 611 662 IPR023299 GO:0000166
Eupl05g01992 860 Gene3D - 297 419 - -
Eupl05g01992 860 Pfam Heavy-metal-associated domain 11 71 IPR006121 GO:0046872
Eupl05g01992 860 ProSitePatterns Heavy-metal-associated domain. 14 43 IPR017969 GO:0046872
Eupl05g01992 860 Gene3D - 536 610 IPR023299 GO:0000166
Eupl05g01992 860 Gene3D - 496 788 IPR023214 -
Eupl05g01992 860 FunFam Probable copper-transporting ATPase HMA5 632 788 - -
Eupl05g01992 860 FunFam Copper-transporting ATPase 1, putative 297 419 - -
Eupl05g01992 860 SUPERFAMILY Calcium ATPase, transmembrane domain M 174 806 IPR023298 -
Eupl05g01992 860 ProSiteProfiles Heavy-metal-associated domain profile. 8 74 IPR006121 GO:0046872
Eupl05g01992 860 ProSitePatterns E1-E2 ATPases phosphorylation site. 531 537 IPR018303 -
Eupl05g01992 860 Pfam haloacid dehalogenase-like hydrolase 525 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01992 Eupl-Chr5 45450011 45461275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01992 6 860 Primary Pumps ATPases AT1G63440 59.013 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01992 K17686 - psom:113322545 1313.9