Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01981 ATGGGAGCCCGTTGCTCCAAATTCTCCCTCTGCTGGTGGCAATCTCATTTCAAGCCCACCGACCTTGAGTCCTCCGATATCGAGAACGGGGGCAAAAACGACTGCGACTCCTTGCCTGGCTTCAGCGAGTTCAGCCTCGAGCAGCTTAGGGTTGCCACCTCTGGGTTTTCCGTTGATAACATCGTCTCCGAGCACGGAGAGAAAGCTCCCAACGTTGTTTATAAAGGAAAGCTCGATAACGATCGGTGGATCGCCGTTAAGCGATTCAACAAGTCGGCCTGGCCCGATACTCGCCAATTCCTCGAGGAAGCGAGATCGGTCGGTCAGCTGCGGAATGAGCGGTTGGCGAATCTGATCGGATGTTGCTTCGAAGGCGACGAGAGATTGCTCGTTGCCGAGTTCATGTCGAACGAAACCCTCGCAAAGCATCTCTTCCATTGGGAGACGCAACCCATGAAATGGGCTATGAGGGTAAGAGTGGCATTGTATTTGGCGCAAGCTTTGGAATATTGTAGCAGTAAAGGGCGGGCTTTGTATCACGACCTCAACGCTTATAGAGTCTTGTTTGATCAGGATGGTAATCCCAGGCTGTCATGCTTTGGCCTCATGAAGAATAGCAGAGATGGAAAGAGTTATAGTACAAACTTGGCTTTCACCCCTCCAGAGTACTTGAGGACAGGAAGAGTAACACCAGAAAGTGTAGTTTACAGCTTTGGCACCCTATTGCTTGATCTTCTTAGTGGCAAACATATTCCCCCAAGCCATGCACTCGATCTGATACGTGGCAAGAATTTTCTGATGCTGATGGATTCTTGTTTGGAGGGTCATTTCTCAAATGATGATGGAACTGAAGTTGTGCGATTATCTTCTCGTTGTTTACAATATGAACCTCGTGAGAGGCCAAATGCAAAGTCACTTGTGACTGCTCTTACTTCTCTTCAGAAAGAAACAGAGGTTGCATCACATGTTTTGATGGGTATTCCGCATGGAACTGCATCCCCAACACAGCCATTGTCATTGACACCTTTAGGTGAAGCTTGCTCTAGAATGGATCTCACTGCCATACATGAAATATTGGAGAAGGTTGGATACAAAGATGATGAGGGGATTGCCAATGAGCTTTCTTTTCAAATGTGGACGAACCAAATGCAGGAGACCTTGAATTCTAAGAAACATGGAGACACTGCTTTTCGAGCTAAAGATTATGCAACTGCCATTGATTGTTACACGCAGTTCATCGATGGTGGGATAATGGTATCACCTACCGTATTTGCTCGCCGCTGCTTGTCTTACTTGATGAATGACATGCCACAAGAAGCCCTTGGGGATGCTATGCAAGCCCAGGTGGTGTCCCCTGAGTGGCCCACCGCTTTCTATCTTCAAGCGACCTCCCTTTTCAGTCTTGGAATGGAAACTGACGCCCAAGAGACGCTCAAGGATGGGACAGCCTTGGAAACCAGAAGGAATAACAGACGCTGA 1479 0.4807 MGARCSKFSLCWWQSHFKPTDLESSDIENGGKNDCDSLPGFSEFSLEQLRVATSGFSVDNIVSEHGEKAPNVVYKGKLDNDRWIAVKRFNKSAWPDTRQFLEEARSVGQLRNERLANLIGCCFEGDERLLVAEFMSNETLAKHLFHWETQPMKWAMRVRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEVVRLSSRCLQYEPRERPNAKSLVTALTSLQKETEVASHVLMGIPHGTASPTQPLSLTPLGEACSRMDLTAIHEILEKVGYKDDEGIANELSFQMWTNQMQETLNSKKHGDTAFRAKDYATAIDCYTQFIDGGIMVSPTVFARRCLSYLMNDMPQEALGDAMQAQVVSPEWPTAFYLQATSLFSLGMETDAQETLKDGTALETRRNNRR* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01981 492 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Eupl05g01981 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 19 489 IPR045845 GO:0004672|GO:0009742
Eupl05g01981 492 FunFam probable serine/threonine-protein kinase At4g35230 384 492 - -
Eupl05g01981 492 SUPERFAMILY TPR-like 390 484 IPR011990 GO:0005515
Eupl05g01981 492 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Eupl05g01981 492 SUPERFAMILY Protein kinase-like (PK-like) 37 318 IPR011009 -
Eupl05g01981 492 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Eupl05g01981 492 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Eupl05g01981 492 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01981 492 Gene3D Tetratricopeptide repeat domain 384 492 IPR011990 GO:0005515
Eupl05g01981 492 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01981 Eupl-Chr5 45362360 45372154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01981 44 337 Glycoside Hydrolase AT3G07070 33.851 3.78e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Eupl05g01981 PK_Tyr_Ser-Thr 7.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01981 - - nnu:104597050 915.99