Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01967 ATGGCCGTGAATGAAGATCCAGAACAAGAATATGTTCCCAAAAAGAAGAAATCGCCTAGCGATGAAGAGAAAGAGAAGAGGAGAAAGAAAATTGTGGCCGGAAGTTTGATGAAAGCTGAGATAAGGCCGGGAGCAGGTACTGCGAAACCTGTAGATGATGATCAGGTTGTATATCATTGCACAGTTCGAACGCTAGACGGCGTTATTGTTGAGTCTACAAGATCAGAACACGGAGGCAAAGGCAATCCAATAAGAGATGTCTTGGGAAAAAGCAAGATGATACTGGGATTGTTAGAAGGGATTCCCACCATGTTGAAGGGTGAAGTAGCAATGTTGAAGATGAAACCTGAACTGCACTATGGTGAGGTTGATTGTCCAGTTACAGTTTCGGAGAGCTTCCCCAAACATGATGAACTTCATTTTGAGATTGAGCTGATAGATTTCTTTAAAGTTAAGGTTATTAGTGAGGATTTGGGAGTTGTGAAGAAGGTAATAAATGAAGGGGAGGGATGGGAATCTCCAAGGGAACCTTACGAAGTAAAAACTTGGATTTCTGCAAAGACAGGTGACGGGAAGTTGATTCTGTCACATACAGAAGGAGAACCATTTTTCTTTACTTTAGGAAAATCCGAGGTACCTAAAGGTCTTGAGATGGGAATAGGAACAATGACTCGGGGAGAGAAGGCTATAGTATATGTTACCAATCGTTATTTAACTCAATCTCCTTTCATGCCGGTGGTAGAAGGTTTTGAAGAAGTTCAGTTTGAAGTGGAGTTAGTCCACTTTATTCAGGTGAGAGACATGCTTGGTGATGGTCGTCTCATAAAACGTCGCATTCGTGATGGAAAAGGTGAGTTTCCTATGGATTGCCCCCTTCATGACAGTCTACTACGCGTGCATTATAAGGGCATGCTTCTTAATGAAGAAAGGACGGTGTTCTATGATACAAGAGTTGATAACAATGGTCAGCCTCTGGAGTTTAGTTCGGGAGAAGGGCTTGTGCCCGAAGGACTTGAAATGTGTGTTCGTCTGATGCTGCCTGGAGAGATGGCTCTTGTCACATGCCCTCCAGATTATGCATATGACAAGTTTGCAAGGCCTGCAAACGTTTCCGAAGGTGCTCATATTCAATGGGAAATTGAGCTGCTTGGTTTTGAGATGCCAAAGGATTGGACTGGTTTAAACTTCACAAGTATAATGGAAGATGCTGATAAAATAAGAAGCACGGGAAACAGGCTTTTCAAAGAAGGAAAGTATGAACTAGCTAAGGCGAAGTATGAGAAGGTGCTTCGAGAATTTAATCATGTTAATCCACAAGATGACGAGGAAGGGAAAATCTTTTTGAATTCAAGAAATTCATTACATCTAAATGTGGCCGCCTGCTACCTGAAAATGGGTGAATGCAGAAAATCCATTGAGGCATGTAACAAGGTATTGGATGCGAATCCTGTACATGTGAAAGCTCTCTATCGTCGTGGTATGGCCTACATGTCGGCTGGAGATTTCGAAGAAGCAAGGAGCGATTTTAAAATGATGTTAACCATTGACAAGTCTTCAGAACCTGATGCAACCGCTGCTCTTCTTAAGCTAAAGCAAAAGGAACAGGAAGTTGAGAGGAAGGCTCGGAAACAATTTAAAGGGCTGTTCGACAAGAAGCCCGGGGAAATTGCGGATGTTGGAACTGAGTTGAGTGAAAACCAAAACCCAGAAGTTGAAAACCTTGAAAGTCGTGATCAGGCAGATTCAGATGGGGAGGCAGAGGGAATTCATGAAGCTGCTCCGCCTCCAATGGGTTTGTTCTCCCGGTTTTGGCCTGTTGGTAGTAGACTCTTCACAGCTCTTGGGCTACAAAGATGTACCATTTTGTGA 1869 0.4307 MAVNEDPEQEYVPKKKKSPSDEEKEKRRKKIVAGSLMKAEIRPGAGTAKPVDDDQVVYHCTVRTLDGVIVESTRSEHGGKGNPIRDVLGKSKMILGLLEGIPTMLKGEVAMLKMKPELHYGEVDCPVTVSESFPKHDELHFEIELIDFFKVKVISEDLGVVKKVINEGEGWESPREPYEVKTWISAKTGDGKLILSHTEGEPFFFTLGKSEVPKGLEMGIGTMTRGEKAIVYVTNRYLTQSPFMPVVEGFEEVQFEVELVHFIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLRVHYKGMLLNEERTVFYDTRVDNNGQPLEFSSGEGLVPEGLEMCVRLMLPGEMALVTCPPDYAYDKFARPANVSEGAHIQWEIELLGFEMPKDWTGLNFTSIMEDADKIRSTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKIFLNSRNSLHLNVAACYLKMGECRKSIEACNKVLDANPVHVKALYRRGMAYMSAGDFEEARSDFKMMLTIDKSSEPDATAALLKLKQKEQEVERKARKQFKGLFDKKPGEIADVGTELSENQNPEVENLESRDQADSDGEAEGIHEAAPPPMGLFSRFWPVGSRLFTALGLQRCTIL* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01967 622 PANTHER PEPTIDYLPROLYL ISOMERASE 156 262 - -
Eupl05g01967 622 Gene3D - 2 150 IPR046357 GO:0003755
Eupl05g01967 622 FunFam Peptidylprolyl isomerase 264 388 - -
Eupl05g01967 622 ProSiteProfiles TPR repeat profile. 486 519 IPR019734 GO:0005515
Eupl05g01967 622 FunFam Peptidylprolyl isomerase 153 263 - -
Eupl05g01967 622 Pfam Tetratricopeptide repeat 462 514 - -
Eupl05g01967 622 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 263 IPR001179 GO:0003755
Eupl05g01967 622 MobiDBLite consensus disorder prediction 560 594 - -
Eupl05g01967 622 Gene3D - 151 265 IPR046357 GO:0003755
Eupl05g01967 622 FunFam Peptidylprolyl isomerase 8 152 - -
Eupl05g01967 622 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 295 383 IPR001179 GO:0003755
Eupl05g01967 622 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 177 260 IPR001179 GO:0003755
Eupl05g01967 622 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 146 IPR001179 GO:0003755
Eupl05g01967 622 SUPERFAMILY FKBP-like 268 385 - -
Eupl05g01967 622 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 53 149 IPR001179 GO:0003755
Eupl05g01967 622 FunFam Peptidylprolyl isomerase 391 547 - -
Eupl05g01967 622 SUPERFAMILY TPR-like 401 541 IPR011990 GO:0005515
Eupl05g01967 622 Gene3D Tetratricopeptide repeat domain 402 551 IPR011990 GO:0005515
Eupl05g01967 622 Gene3D - 267 401 IPR046357 GO:0003755
Eupl05g01967 622 SUPERFAMILY FKBP-like 29 152 - -
Eupl05g01967 622 SUPERFAMILY FKBP-like 154 262 - -
Eupl05g01967 622 Coils Coil 523 543 - -
Eupl05g01967 622 MobiDBLite consensus disorder prediction 8 31 - -
Eupl05g01967 622 SMART tpr_5 486 519 IPR019734 GO:0005515
Eupl05g01967 622 SMART tpr_5 452 485 IPR019734 GO:0005515
Eupl05g01967 622 SMART tpr_5 403 436 IPR019734 GO:0005515
Eupl05g01967 622 MobiDBLite consensus disorder prediction 571 588 - -
Eupl05g01967 622 MobiDBLite consensus disorder prediction 1 31 - -
Eupl05g01967 622 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 294 386 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01967 Eupl-Chr5 45186819 45214931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01967 30 551 Calmodulin-binding Proteins AT3G25230 31.638 4.56e-67 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01967 - - msin:131252726 1038.1