Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01950 ATGGAAGATCAAGACGTGCTCGCTACAAGGACAGAAAACCATTTGGAAGGGGAAGTGCAGAAACCAACTGAAGCAATTGAAGTTATTTCTAAGCCACATTTATTTTCTTGCGACCCCGTTTGTGGACTGTTGAAACAAGCAAAGCAAAGGTCAGAGTCTGAACACCGGTCTAAATCAGCTACGAAACTTTGCGGGCTCATCATTTTCTGTCTAATTTTCATGGTGGTAGAAATTGTTGGAGGTGTCAAGGCCAACAGCCTAGCAGTTCTCGCTGATGCAGCTCACTTGCTTACGGATGTTGCTGGATTCTCCATCTCTCTTTTCACAGTATGGGCTTCGGGGTGGGAGGCAACACCTCATCACTCTTTTGGGTTTTCCCGGCTTGAAGCTTTGGGAGCACTCTTCTCTGTACAGCTCATTTGGCTGATTGCTGGGTTCTTAATCTATGAAGCCATTGATAGAATTCTGAGCAGAAATGTAATGGTGAATGGGAAGCTCATGTTCGCGACTGCAGCAATTGGATTTTTCATCAATTTAATCATGGTCACATGGCTTGGTCATGATCACATTCATCATGCCTGTGGGAACAAAGAGCATTATCAAGAAGGGGAAGATGCAAACATGGTAACTGGAGAGGAGGAGACTAATCTCATATCAAGTCCTTCAGATGAGCATCATTGCGAGATTGGACATCGCGGAGTTCAGAACCAAACCATACTAAACATGAGTCTTCAAGGTGCATATTTGCATGTCCTGGGTGACCTCATACAGTCCATTGGTGTGATGATTAGTGGGGCCATCATATGGGCAAAGCCAGATTGGTTGATAGTTGATCTCTTCTGTACTCTGGGTTTCTCTGTGCTTGTTCTGTTTACTACTGTAAGCATGCTTAGAAACATATTAGCTATACTGATGGAAAGCACACCGATTGGAGTCGATATAGCTAGACTTGAAACTGGTCTTAAATGTATCAAAGGCGTTCAGGATGTCCATGACCTACATGTTTGGGCCATATCACTTGGGAAAATTTTGTTGTCGTGTCATGTAACAGCTGAGCCGGGTGCCGACTCAAATGAAATTCTTCTCAAGACTAGAGATTACTGTGAAAAAATATATGGGATTCGTCATGTAGCTGTACAGATTGAACAGGAGTAA 1155 0.4346 MEDQDVLATRTENHLEGEVQKPTEAIEVISKPHLFSCDPVCGLLKQAKQRSESEHRSKSATKLCGLIIFCLIFMVVEIVGGVKANSLAVLADAAHLLTDVAGFSISLFTVWASGWEATPHHSFGFSRLEALGALFSVQLIWLIAGFLIYEAIDRILSRNVMVNGKLMFATAAIGFFINLIMVTWLGHDHIHHACGNKEHYQEGEDANMVTGEEETNLISSPSDEHHCEIGHRGVQNQTILNMSLQGAYLHVLGDLIQSIGVMISGAIIWAKPDWLIVDLFCTLGFSVLVLFTTVSMLRNILAILMESTPIGVDIARLETGLKCIKGVQDVHDLHVWAISLGKILLSCHVTAEPGADSNEILLKTRDYCEKIYGIRHVAVQIEQE* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01950 384 Gene3D Cation efflux protein transmembrane domain 62 304 IPR027469 -
Eupl05g01950 384 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 316 382 IPR036837 -
Eupl05g01950 384 NCBIfam cation diffusion facilitator family transporter 66 383 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Eupl05g01950 384 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 20 383 - -
Eupl05g01950 384 Pfam Cation efflux family 67 305 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Eupl05g01950 384 SUPERFAMILY Cation efflux protein transmembrane domain-like 61 306 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01950 Eupl-Chr5 44956046 44959614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01950 1 384 Inorganic Solute Cotransporters AT2G29410 45.833 1.64e-109 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01950 K14689 - jre:109020645 467.618