Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01946 ATGGCGGAGGGTTTCGAACCCTTTCACGTCCCACAACAAAGTCGAAGAGATAAACTTAGAGTCGTTCAAAACCACTCCAGTTGCGAACCACCACCACCAGCTACCCATCATGGGTTCGCAGGTTTACTCCCTCTCTACGATCCGCCACTGTTTTCCTCTCAAATTCTAACCTGCGCCAACCCACTTGGAGGTGCACGAGGTGAGGATTGTAACCACAGCCCAGTTTCTGTTTTCTCAGTTGTCAATACCGCTTCGTCGTCGTCTTCTTCTCATTATCATCCTTACTTGGATCCACAGTCTTCTCTTGCTGCAAATGTAAACCCTAGCTCGATTCAAGCTATTATCGACAACCCATTTCCTTGGACGGCCAAAAACCTTGAAGATTTTGGTCAGTCGTTTAATGGCGAACAAGTGGTGACGTTTAAGCCAGAACCCTTGTCGTTAACCCACGATACGACAACGACGGAGCGAGGGTTGTCTCTGTCTCTGTCTTCTCACCATACTCAACAACATAATCTCCCTCCAGAATTGAGTCTACCACGATATAAGTCTGCCATGTTCGACGAAAAGGATATCGGAGGGTATGCAGTTCGAGGGATTGTCGGCGGTGGTGCGTCGAAGTCGAACCTTGTGTCGAGGAGTTCGGTTCCTTTCGAACCATTTATGGGCTACCCTTCAATCTTGAAGGGATCTAGGTTCTTGAAGCCCACACAGAAGCTCTTGGAGGAGTTTTGTGATGTGGGTCGGGGAATTTATGTCGGAATTAGCTCTGGAGATTCGTCTTTGATGGATCCTCTGATTGATAGTTTGAATGGAGCTCCGGTTGTTGATGATCCGCTCACTTGCAGCGATCATGGCGAGTATTGGAGAAAGAAGACGAGGTTAATACCGATGTTGGACGAGGTCTACAGGAGATACAAGCAGTACTACCAGCAGATGAAGGCAGTTGTTGCATCCTTTGAGTCCGTTGCAGGGCTTGGCAATTCCGCTTCCTGCACACTTTTTGCTCTCAAAGCCATGTCAAAGCACTTCAGATGCTTCAAGAACACAATCACTGAACAACTTCACTTTACCAGAAAAGATCCAGCTGAGGGAAACTTTAGTAAAGATGAGGCTCCACGGTTTGGGATCACTGATCGAGGCCTCCATAGCCAAAGACCACCTCACAACTCGGGCATTCTCAAGCACCAGTATGTTTGGCGACCACAAAGAGGACTTCCTGAACATGCTATCGCTGTGCTCAAGGCTTGGTTGTTTGGTCACTTCCTACACCCGTATCCTACTGATACAGACAAGCAAATGTTGGCTAAACAAACGGGTCTATCAAGAAATCAGGGAAGTGTATGGCTGGGTGGTTTTTTTATATGTTCATACGCATTAAATGCTACGGCTGAGACACCGCCAGGATACATCATGGACAGCATTTACAGTTGGAAAAAATGA 1443 0.4726 MAEGFEPFHVPQQSRRDKLRVVQNHSSCEPPPPATHHGFAGLLPLYDPPLFSSQILTCANPLGGARGEDCNHSPVSVFSVVNTASSSSSSHYHPYLDPQSSLAANVNPSSIQAIIDNPFPWTAKNLEDFGQSFNGEQVVTFKPEPLSLTHDTTTTERGLSLSLSSHHTQQHNLPPELSLPRYKSAMFDEKDIGGYAVRGIVGGGASKSNLVSRSSVPFEPFMGYPSILKGSRFLKPTQKLLEEFCDVGRGIYVGISSGDSSLMDPLIDSLNGAPVVDDPLTCSDHGEYWRKKTRLIPMLDEVYRRYKQYYQQMKAVVASFESVAGLGNSASCTLFALKAMSKHFRCFKNTITEQLHFTRKDPAEGNFSKDEAPRFGITDRGLHSQRPPHNSGILKHQYVWRPQRGLPEHAIAVLKAWLFGHFLHPYPTDTDKQMLAKQTGLSRNQGSVWLGGFFICSYALNATAETPPGYIMDSIYSWKK* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01946 480 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 102 450 - -
Eupl05g01946 480 Pfam Associated with HOX 227 352 IPR006563 -
Eupl05g01946 480 SUPERFAMILY Homeodomain-like 401 449 IPR009057 -
Eupl05g01946 480 CDD homeodomain 400 449 IPR001356 GO:0003677
Eupl05g01946 480 Gene3D - 406 456 - -
Eupl05g01946 480 SMART prehox3 222 353 IPR006563 -
Eupl05g01946 480 Pfam Homeobox KN domain 417 450 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01946 Eupl-Chr5 44906723 44914824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01946 129 450 Homeobox Transcription Factor Family AT5G02030 46.726 1.31e-73 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01946 - - vvi:100266680 540.806