Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01935 ATGAGAAACCCGTCTCCTTTCTCTCCAATCCTTCCTCCCTTTCTTCTCATCTTTCTCATCTGCGTTAACTCTTCTTCAGCATCTTCAACACCCCGGAGTTTTTTGTACAGAGGCTCTTCTCTACCAGTTGAAGATGATTCAGCCCTTCTCGCCTCCGCAGACAAATCCTTCTCCTGTGGGTTTTACCTGGTGGGCACAAATGCTTACTGTTTCTCAATTTGGTTCACCAATTCAGCGAACAGAACCGTCGTTTGGATGGCAAACCGAGACCAACCAGTGAACGGCCTAGGCTCGAGAATTTCACTCCACCGGGATGGCACCATGGTCTTAGACGACATCGATGGCTCGACTGTTTGGTCCACCAACACCACCAACACAGGGGTCGATAAAGCTGAGCTTCTGAACACCGGAAATCTCGTGCTCAAGGACTCACATGGTAAAATTCTATGGCAAAGTTTTGATTCTCCTACCGACACTCTTCTCCCGTCACAAAATATCACCAAGAGTCTGAAACTGATCTCTGCAAAGGGAAACGGAACATATTCTTCAGGTTATTATAGTTTTTATTTCAGTAATGACAATACTTTGAGATTAGTATATGATGGGCCCGAGATTTCTAGCCTGTATTGGCCTAATCCTGATTTTTCCATCTTCCAAAATGGTAGAACAAATTACAACAGTAGCAGAATTGCTGTTCTTGATGAAATGGGCTGGTTTAAATCCAGTGATAAGATGGAATTCAACGCTTCTGATAAGGGTTTTGGGATTAGAAGGAGGTTAACTATGGATTATGATGGTAATCTTAGACTCTATAGCTTGAATGAGTCTACGAGATCATGGGTAATCTCATGGGAAGCTCTCTCACAGCAGTGCAATGTGCACGGGTTGTGCGGCAGAAATGGGATATGTGTTTATACTCCGAAACCTATGTGTTCATGTCCTCCGGGTTATGAGATCAGTGATCCAAGTGACTGGAACAAAGGTTGCAAGCCGAAGTTTAACAGGAGCTGTGACCAACCTCAGCAGGAAAAAATTGTGGAGATTCCCCAGACAGATTTCTATGGGTTCGATCTCGATTACCACACATCCATATCATTCGAAACTTGCAAGAATTACTGCTTGGCGGATTGCTCTTGTGAGGCTTTCAGCTACAGGTTAGACGGGGAGGGGCGCTGTTACACAAAAAGTGCTCTTTTTAATGGGTACAAGTCTCCAAATTTCCCAGGCAGCATATATTTGAAACTACCCAGAAATGTCGAAACATCAGAACACATTATTCTCAAAAGATCTGAGCTTATCTGCAACTTCAGTCAAGCTGAAGTTCTGATTGGTTCTTCCGATATGTATGTACTTGCTCGTTCAAGGACAAAATGGGTTTATCTCTACTGGTTCGTTTTGGTCATTGGTGTGATTGAGATCCTCTTTATCACTTTGGGTTGGTGGTTCCTCTATAGGAGACACGGTATACCAATATCAGTGGAGAATGGATACCATGCAATATCCAGTCAGTTCAAAAAGTTCACTTACACAGAGCTGAAGGCGGCGACCAAGAAGTTCAAGGAAGAACTGGGTAGGGGAGGCTCTGGGGCTGTTTACAAGGGAGTTTTGGGGGATAATAGAGTCGTGGCAGTGAAGAAACTGGGTGATGTGTTTCAAGGAGACGAAGAGTTTTGGGCTGAAGTGAGCACGATAGGGAGAATCTACCACATGAACCTAGTGAAAATGTGGGGTTTCTGTTCAGAGGGGACACACAGACTCTTAGTGTATGAGTACTTGGAGAATGGTTCACTGGACAAACACCTGTTTTCCAATGTCAGCAGCAGCAACAGCAGTAGAACAGCCAGTCCGCTTGGATGGAAGGAAAGGTTTAAAATTGCACTAGGGGCAGCCAGGGGGCTTGCCTATCTTCACCATGAGTGTCTGGAGTGGGTTATCCACTGTGATGTGAAGCCTGAAAACATACTTTTGGACTCAGATTTTGAACCAAAGATTGCGGATTTCGGTCTGGCAAAGTTGACTCAGAGAGGTGGGTCAGGTTCTGAGTTCTCTCGGATCCGAGGAACAAAGGGATACATGGCTCCAGAGTGGGCCCTCAATCTTCCTATCACTGCAAAGATTGATGTTTATAGCTTCGGAGTTGTACTTCTAGAGATTGTGAAGGGCATTCGACTTTCGAATTGGGTGATGGTGGATGGGGAAGAAGTGGAGGAGGCAGAGCTGACAAGGTTTGTCAGAGTGGTTAAGAGGAAAATTGCGTCCAGAGAAGACCAGTGGATTGAAGATATAATGGATCCAAGATTGAATGGGCAGTTCAATCGGAGCCAAGCAGCAACCCTGGTAGAGATAGGCATCTCCTGTGTGGAGGAGGACAAAAGCAAGAGACCAACTATGGATTCAGTAGTCCAAGCTCTCCTAGACTGTGAAGATGAAACGAAAGTCCATACTGTAAAGATGCTGTAA 2460 0.45 MRNPSPFSPILPPFLLIFLICVNSSSASSTPRSFLYRGSSLPVEDDSALLASADKSFSCGFYLVGTNAYCFSIWFTNSANRTVVWMANRDQPVNGLGSRISLHRDGTMVLDDIDGSTVWSTNTTNTGVDKAELLNTGNLVLKDSHGKILWQSFDSPTDTLLPSQNITKSLKLISAKGNGTYSSGYYSFYFSNDNTLRLVYDGPEISSLYWPNPDFSIFQNGRTNYNSSRIAVLDEMGWFKSSDKMEFNASDKGFGIRRRLTMDYDGNLRLYSLNESTRSWVISWEALSQQCNVHGLCGRNGICVYTPKPMCSCPPGYEISDPSDWNKGCKPKFNRSCDQPQQEKIVEIPQTDFYGFDLDYHTSISFETCKNYCLADCSCEAFSYRLDGEGRCYTKSALFNGYKSPNFPGSIYLKLPRNVETSEHIILKRSELICNFSQAEVLIGSSDMYVLARSRTKWVYLYWFVLVIGVIEILFITLGWWFLYRRHGIPISVENGYHAISSQFKKFTYTELKAATKKFKEELGRGGSGAVYKGVLGDNRVVAVKKLGDVFQGDEEFWAEVSTIGRIYHMNLVKMWGFCSEGTHRLLVYEYLENGSLDKHLFSNVSSSNSSRTASPLGWKERFKIALGAARGLAYLHHECLEWVIHCDVKPENILLDSDFEPKIADFGLAKLTQRGGSGSEFSRIRGTKGYMAPEWALNLPITAKIDVYSFGVVLLEIVKGIRLSNWVMVDGEEVEEAELTRFVRVVKRKIASREDQWIEDIMDPRLNGQFNRSQAATLVEIGISCVEEDKSKRPTMDSVVQALLDCEDETKVHTVKML* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01935 819 CDD PAN_AP_plant 333 416 - -
Eupl05g01935 819 FunFam Serine/threonine-protein kinase 345 424 - -
Eupl05g01935 819 SUPERFAMILY Protein kinase-like (PK-like) 500 804 IPR011009 -
Eupl05g01935 819 FunFam S-receptor-like serine/threonine-protein kinase 489 591 - -
Eupl05g01935 819 ProSiteProfiles Bulb-type lectin domain profile. 26 154 IPR001480 -
Eupl05g01935 819 SMART ntp_6 340 415 IPR003609 -
Eupl05g01935 819 Pfam Protein kinase domain 519 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01935 819 CDD STKc_IRAK 523 804 - -
Eupl05g01935 819 SMART serkin_6 517 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01935 819 FunFam Serine/threonine-protein kinase 157 284 - -
Eupl05g01935 819 Gene3D - 32 154 IPR036426 -
Eupl05g01935 819 ProSiteProfiles Protein kinase domain profile. 517 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01935 819 Gene3D Transferase(Phosphotransferase) domain 1 592 818 - -
Eupl05g01935 819 Pfam S-locus glycoprotein domain 256 318 IPR000858 GO:0048544
Eupl05g01935 819 Gene3D Phosphorylase Kinase; domain 1 491 591 - -
Eupl05g01935 819 FunFam Serine/threonine-protein kinase 32 154 - -
Eupl05g01935 819 CDD EGF 291 318 - -
Eupl05g01935 819 Pfam PAN-like domain 361 395 IPR003609 -
Eupl05g01935 819 Pfam D-mannose binding lectin 82 169 IPR001480 -
Eupl05g01935 819 PIRSF SRK 4 818 IPR024171 GO:0004674
Eupl05g01935 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 214 IPR036426 -
Eupl05g01935 819 CDD B_lectin 50 156 IPR001480 -
Eupl05g01935 819 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Eupl05g01935 819 PANTHER OS07G0415500 PROTEIN 14 806 - -
Eupl05g01935 819 FunFam Serine/threonine-protein kinase 592 812 - -
Eupl05g01935 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Eupl05g01935 819 SMART blect_4 40 156 IPR001480 -
Eupl05g01935 819 Gene3D Hepatocyte Growth Factor 349 410 - -
Eupl05g01935 819 ProSiteProfiles PAN/Apple domain profile. 337 416 IPR003609 -
Eupl05g01935 819 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01935 Eupl-Chr5 44811035 44813846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01935 500 813 Trihelix Transcription Factor Family AT5G38560 41.066 1.90e-64 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl05g01935 Pkinase 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01935 - - msin:131252756 1191.79