Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01934 ATGAAGCTGTTCTGCTTAACCATAGTTTCAGACTGCAAGCCTACTTTTCTCTGTAACCAAGAGAAACCCGTCTCCTTTCTCTCCAATCCTTCCTTCTTTCTTCTTATCTTTCTCATCTGCTTTAACTCTTTTGCATCTTCAACACCCCCCAGTTTTTTGAATAGAGGGTTTTCTCTATCAGTTGAAGATGATTCAGCCCTTCTCACCTCCCCAGACAAATCCTTCTCTTGTGGATTTTATCAGGTGGGCACAAATGCTTACTGTTTCTCAATTTGGTTCACCAACTCAGCAGACAGAACAGTCGTTTGGATGGCGAATCGAGACCAACCAGTTAATGGTCGAGGCTCGAGAATTTCGCTTCACCGGGATGGCACCATGGCCCTCACTGATATCGATGGCTCATCTGTTTGGTCCACCAACACCACCAACTCCAAGGTCGATAAAGCTGAGCTCCTGAACTCTGGAAACCTCGTCCTGAAGGACCCACATGGTAAAATTCTATGGCAAAGCTTTGATTCTCCTACCGACACTCTTCTCCCTTCACAATATATCACCAAGAGCAAGAAACTGATATCTGCGAAGGGAAATGGAACATATTTTTCGGGTTATTATAGTTTCTATTTCAATAATGACAATACTTTGAGATTAGTGTATGATGGGCCTGAGATTTCTAGCTTGTATTGGCCTGATCCTGATTATGATGTATTTCGAAACAAAAGAACAAATTACAACAGTAGCAGAATTGCCGTTCTCGATGAAATGGGCAGGTTTCTATCAAGTGATGAAATGGAATTTACCGCTTCTGATACGGGTTATGGGATTAGAAGGAGGTTAACTATGGATTCTGACGGTAATCTTAGACTCTATAGCTTGAATGAGTCAACGAGATCATGGGTAATCTCATGGGAAGCTCTCTCAAAGCTGTGCAAGGTGCATGGATTGTGCGGCAGAAATGGGATTTGTGTTTATACACCAAAACCTATGTGTTCATGTCCTCCGGGTTATGAGATCAGTGATCCAAGTGACTGGAACAAAGGTTGCAAGCCGAAGTTTAACCAGAGCTGTGAAAAACCTCAGCAGGTAAAATTTGTGGAAATTCACCAGACGGATTTCTATGGGTTTGATATCGATTACGACATATACATATCATTCGAAACTTGCAAGAATTACTGCTTGAAGGATTGCTTTTGTGAGGCTTTCAGCTATAGATTAGAGGGAGAGGGGCGCTGTTACACAAAAAGTGCTCTTTTTAATGGGTACAAGTCGCCAAATTTCCCAGGCAGCATATATTTGAAACTGCCCAGAAATGTAGAAACATCAGAACCCATTAGTCTCAAAATATCTGAGCCTATCTGCAACTCAAGTCGAGCAGACGTTCCGATAGGTTCTTCTGATTTTTCTGTAATTGCTCGTTCAAGGACAAAATGGGTTTATCTCTATTGGTTCGTTTTGGCCATTGGTGTGATTGAGGTCCTCTTTATCACTTCGGGTTGGTGGTTCCTCTATAGGAGACAAGGTGTGCCAATATCAGTGGAGGATGGATACCGTGCCATATCCAGTCAGTTCAAGAAGTTTAGTTACACAGAGCTGAAGAAGGCGACCAAGAAGTTCGAGGAAGAGCTGGGTAGGGGAGGCTCTGGGGCTGTATACAAGGGAGTTTTGGGGGATGATAGAGTGGTGGCAGTCAAGAAACTGGGTGATATGTTTCAAGGAGAAGAAGAGTTTTGGGCTGAAGTGAGCACAATAGGAAGAATCAACCACATGAACCTAGTAAGAATGTGGGGTTTCTGTTCAGAGGGGAGACACAGACTCTTGGTCTCTGAGTATTTGGAGAACGGTTCATTGGATAAGCACCTGTTCTCCAATGTCAGCAGCAGCAGCAGCAGTACAGCTAGTCTGCTTGGATGGAAGGAAAGGTTTAAAATTGCATTAGGGGCAGCCAAGGGACTCGCTTATCTTCACCATGAGTGTCAGGAATGGGTCGTCCACTGTGATGTGAAGCCTGAAAACATACTCTTGGACTCAGATTTTGAACCAAAAATTGCAGATTTTGGTCTGGCAAAGTTGTCTCAGAGAGGTGGGTCAGGTTCTGAGTTCTCTCGGATCAGAGGAACAAAGGGGTACATGGCTCCAGAGTGGACCCTGAATCTTCCTCTCACTGCAAAGGTTGATGTTTATAGCTTCGGGGTTGTACTTCTAGAGATTGTGAAGGGCATTCGACTTTCGAATTGGGTGGTGGTGGATGGGGAAGAGGAGGCAGAGCTGACAATGTTTGTTAGAGTGGTGAAGAGGAAAACTGAGTGCGGAGAAGACAGCTGGGTTGAGGAAATAATTGATCCAAAATTGAATGGGCAGTTCAACCAGAACCAAGCAGCAGCAATGGTACAGATAGGCATCTCCTGCCTGGTTGAGGACAAAAGCAAGAGACCAACCATGGATTCGGTAGTTCAGGCTCTCCTAGAATGTGAAGATGAATGA 2478 0.4419 MKLFCLTIVSDCKPTFLCNQEKPVSFLSNPSFFLLIFLICFNSFASSTPPSFLNRGFSLSVEDDSALLTSPDKSFSCGFYQVGTNAYCFSIWFTNSADRTVVWMANRDQPVNGRGSRISLHRDGTMALTDIDGSSVWSTNTTNSKVDKAELLNSGNLVLKDPHGKILWQSFDSPTDTLLPSQYITKSKKLISAKGNGTYFSGYYSFYFNNDNTLRLVYDGPEISSLYWPDPDYDVFRNKRTNYNSSRIAVLDEMGRFLSSDEMEFTASDTGYGIRRRLTMDSDGNLRLYSLNESTRSWVISWEALSKLCKVHGLCGRNGICVYTPKPMCSCPPGYEISDPSDWNKGCKPKFNQSCEKPQQVKFVEIHQTDFYGFDIDYDIYISFETCKNYCLKDCFCEAFSYRLEGEGRCYTKSALFNGYKSPNFPGSIYLKLPRNVETSEPISLKISEPICNSSRADVPIGSSDFSVIARSRTKWVYLYWFVLAIGVIEVLFITSGWWFLYRRQGVPISVEDGYRAISSQFKKFSYTELKKATKKFEEELGRGGSGAVYKGVLGDDRVVAVKKLGDMFQGEEEFWAEVSTIGRINHMNLVRMWGFCSEGRHRLLVSEYLENGSLDKHLFSNVSSSSSSTASLLGWKERFKIALGAAKGLAYLHHECQEWVVHCDVKPENILLDSDFEPKIADFGLAKLSQRGGSGSEFSRIRGTKGYMAPEWTLNLPLTAKVDVYSFGVVLLEIVKGIRLSNWVVVDGEEEAELTMFVRVVKRKTECGEDSWVEEIIDPKLNGQFNQNQAAAMVQIGISCLVEDKSKRPTMDSVVQALLECEDE* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01934 825 ProSitePatterns Protein kinases ATP-binding region signature. 541 564 IPR017441 GO:0005524
Eupl05g01934 825 Pfam PAN-like domain 381 413 IPR003609 -
Eupl05g01934 825 CDD STKc_IRAK 541 821 - -
Eupl05g01934 825 Gene3D Phosphorylase Kinase; domain 1 509 609 - -
Eupl05g01934 825 CDD B_lectin 68 174 IPR001480 -
Eupl05g01934 825 CDD EGF 309 336 - -
Eupl05g01934 825 ProSiteProfiles EGF-like domain profile. 305 341 IPR000742 -
Eupl05g01934 825 SMART blect_4 59 174 IPR001480 -
Eupl05g01934 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Eupl05g01934 825 FunFam Serine/threonine-protein kinase 50 172 - -
Eupl05g01934 825 Gene3D Transferase(Phosphotransferase) domain 1 610 825 - -
Eupl05g01934 825 ProSiteProfiles Bulb-type lectin domain profile. 44 172 IPR001480 -
Eupl05g01934 825 SMART serkin_6 535 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01934 825 SUPERFAMILY Protein kinase-like (PK-like) 519 819 IPR011009 -
Eupl05g01934 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 232 IPR036426 -
Eupl05g01934 825 PANTHER OS07G0415500 PROTEIN 31 820 - -
Eupl05g01934 825 PIRSF SRK 22 825 IPR024171 GO:0004674
Eupl05g01934 825 Gene3D - 53 173 IPR036426 -
Eupl05g01934 825 FunFam Serine/threonine-protein kinase 363 442 - -
Eupl05g01934 825 CDD PAN_AP_plant 351 434 - -
Eupl05g01934 825 SMART ntp_6 358 433 IPR003609 -
Eupl05g01934 825 FunFam Serine/threonine-protein kinase 175 302 - -
Eupl05g01934 825 Pfam S-locus glycoprotein domain 260 336 IPR000858 GO:0048544
Eupl05g01934 825 Pfam Protein kinase domain 537 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01934 825 ProSiteProfiles PAN/Apple domain profile. 355 434 IPR003609 -
Eupl05g01934 825 ProSiteProfiles Protein kinase domain profile. 535 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01934 825 Pfam D-mannose binding lectin 100 189 IPR001480 -
Eupl05g01934 825 FunFam S-receptor-like serine/threonine-protein kinase 506 609 - -
Eupl05g01934 825 FunFam Serine/threonine-protein kinase 610 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01934 Eupl-Chr5 44796940 44800342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01934 505 819 Receptor kinase-like Gene Family AT5G20050 39.252 1.51e-63 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl05g01934 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01934 - - tss:122649039 1161.75