LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl05g01931	ATGGTGATGGCTCAATCGACGAACAGTGCTAGGGTTGTTGGGGACTATATTGTCGGTCGACAGATTGGATCGGGATCGTTCTCCGTTGTCTGGCACGCAAGGCATCGAGTCCATGGCATGGAGGTTGCGATTAAGGAGATCGTGATGGATCGGCTGAGCAGGAAATTGCAGGAGAGTCTCTTGTCGGAGGTCGCAATACTCGAGAAGATCAACCATCCTAATATCATTCACTTGCACGAAATCATCCAGGCTCCTGGAAGGATACATCTTGTTTTGGAGTACTGCAGAGGGGGAGATCTTTCTTTATATATTAATCGTCATGGAAGAGTTCCAGAAGCAACTGCAAATCACTTCATGCAGCAGCTAGCTGCTGGTCTACAAATACTCCGTGAAAACAATCTTATACACCGAGATCTGAAGCCACAGAATCTCCTCCTCTCCACAAATGACAACCATTCTGTATTGAAAATTGCAGATTTTGGCTTTGCGAGGTCTCTACAACCTAAAGGCCTAGCAGAAACATTGTGTGGTTCACCCCTCTACATGGCTCCAGAAATAATGCAACTCCAGAAGTATGATGCAAAGGCAGATCTCTGGAGTGTTGGTGCTATCCTATTTCAGCTTGTAACTGGGAATACCCCATTTACTGGAAATACTCAATATCAGTTGCAGCAAAACATTTTGAAGTCAAATGAGTTGCGCTTCCCTCCAGATAATAGAGATTTGAGTTCGGATTGCATCGATTTATGTCAGAAGTTGTTACGCCGTAATCCAGTGGAACGGTTAACATTTGAAGAGTTTTTTAACCACCCATTTTTTTCTAAAAACCAACCACAAGAGCCATTGAGGAGTAGTACTGCATTGAGGACAAGAGATGCTTTTCCATTAGCTGAATGCAGTCCTGGGAGGCACACAGAAGAAAGTTCTCAGGATGATTGTCTGCCTTTCCTTTCAGATGATGATTCTAGTGGTCCTGATGGGAGCCCATCCTTTCCTACGAATAGGTTCTCGATGAGGTCTACTTACGGATTTTCTCTTGATACAAAAGTTGATAAAAAGGCAGCAGCTTCTAACTCTTCCACCAACATGGATATTGCTTCCAGTTCGAGATCTAGTGGTGTCACACATAACATGGAAAGTACTGGCTTTAGGTTTGATCAACGTAAATCTTCATATGGAAATCTCAAAGAACCCATGACAGCCTTAGACCAAAGACCAATGAAAGCTTCTTCCAAAGTTGTGGATTCGTTGGAGTTCATTGATCAGGAATATGTCCTTGTATCTGGACCCCCGATGGAGGTGTCATCTTCATCAGTAAGTGCATCCAGGCCACGCCATTCACCATGGAAATCAGAGAATTCCCCCACAGCATCTGTAAATAAAAGCAGGGCATTAAGTGCACCAATGCCTATTACTGGTGCAGCAATCAGTAACACTTGTGGGGTTGGAAGCTTGGAAAGTCACAGCTCTGCGCCTTCTGGGACTTCACAAGGATCAATGGATATGGGAGATGCTTTGGAGCAGCCATCAGCTCACTGTCCGACAAGGATTAGGTCATTGCAGCAGTGTGCATCTGCCATCAAGGAATTAGTGAACGAGAAGATTGAGGCAGGTAGGCAGTTTGAAGCCTTCTCAATTCAGCTGGTAATTCTGGCAATTTGGAAGCAAGCATTGCATATCTGCCATACACAGGCTGCCTCGGCTATTGAAGGAAGTCCGACCCAAGAGACAACTCGAATCAGAAGCAACAACAAGAAGAATAGTAGTCCAGACATCCGAGAATGTCTTAATATTGTTGACACTCAAGGTCCGGAGGCTGTTTGCGTCCATATTGAGAGGGAATTTCTTCTTGAAGTTGGGAATGCCGAGGAACTCGCCAGGGTTGTTGAGCCAATTGATGGAAGTACGGAGATGCCAGATGCCATGGAGACAATATTCCAATCTGCCCTTGCATTGGGCAGAAATGGCGCTGTTGATGAACTGATAGGCGATATGGAGAGTGCGGTATCCCTATATTCAAAAGCAGTACGCTTGCTAGTTTTTGTTCTAGTGGAAGCACCTTCCCTTATCCTCAACCCTCCCTTCTCCCTCACAAATTCGGACCGCCTTCGGCTCCGGACATACATCGAAATTCTGAACAACAGGCAAGGCCAGTCGAGATCTCAGAGGATGGCCCTTTTCAAGCGTGAGGTTCAACAATGCCCACCTTGA	2211	0.455	MVMAQSTNSARVVGDYIVGRQIGSGSFSVVWHARHRVHGMEVAIKEIVMDRLSRKLQESLLSEVAILEKINHPNIIHLHEIIQAPGRIHLVLEYCRGGDLSLYINRHGRVPEATANHFMQQLAAGLQILRENNLIHRDLKPQNLLLSTNDNHSVLKIADFGFARSLQPKGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGNTPFTGNTQYQLQQNILKSNELRFPPDNRDLSSDCIDLCQKLLRRNPVERLTFEEFFNHPFFSKNQPQEPLRSSTALRTRDAFPLAECSPGRHTEESSQDDCLPFLSDDDSSGPDGSPSFPTNRFSMRSTYGFSLDTKVDKKAAASNSSTNMDIASSSRSSGVTHNMESTGFRFDQRKSSYGNLKEPMTALDQRPMKASSKVVDSLEFIDQEYVLVSGPPMEVSSSSVSASRPRHSPWKSENSPTASVNKSRALSAPMPITGAAISNTCGVGSLESHSSAPSGTSQGSMDMGDALEQPSAHCPTRIRSLQQCASAIKELVNEKIEAGRQFEAFSIQLVILAIWKQALHICHTQAASAIEGSPTQETTRIRSNNKKNSSPDIRECLNIVDTQGPEAVCVHIEREFLLEVGNAEELARVVEPIDGSTEMPDAMETIFQSALALGRNGAVDELIGDMESAVSLYSKAVRLLVFVLVEAPSLILNPPFSLTNSDRLRLRTYIEILNNRQGQSRSQRMALFKREVQQCPP*	737

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl05g01931	736	CDD	STKc_ATG1_ULK_like	22	272	-	-
	Eupl05g01931	736	MobiDBLite	consensus disorder prediction	431	462	-	-
	Eupl05g01931	736	ProSitePatterns	Protein kinases ATP-binding region signature.	22	45	IPR017441	GO:0005524
	Eupl05g01931	736	SMART	serkin_6	16	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl05g01931	736	MobiDBLite	consensus disorder prediction	483	508	-	-
	Eupl05g01931	736	MobiDBLite	consensus disorder prediction	483	503	-	-
	Eupl05g01931	736	SUPERFAMILY	Protein kinase-like (PK-like)	12	274	IPR011009	-
	Eupl05g01931	736	MobiDBLite	consensus disorder prediction	293	335	-	-
	Eupl05g01931	736	ProSiteProfiles	Protein kinase domain profile.	16	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl05g01931	736	FunFam	Serine/threonine-protein kinase ATG1	8	312	-	-
	Eupl05g01931	736	PANTHER	SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED	6	649	IPR045269	GO:0004674\|GO:0006914
	Eupl05g01931	736	MobiDBLite	consensus disorder prediction	569	588	-	-
	Eupl05g01931	736	MobiDBLite	consensus disorder prediction	355	379	-	-
	Eupl05g01931	736	FunFam	Aurora kinase A	8	98	-	-
	Eupl05g01931	736	Pfam	Protein kinase domain	17	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl05g01931	736	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	134	146	IPR008271	GO:0004672\|GO:0006468
	Eupl05g01931	736	Gene3D	Transferase(Phosphotransferase) domain 1	6	311	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl05g01931	Eupl-Chr5	44758283	44768698	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl05g01931	8	302	CBL-interacting serine-threonine protein kinases	AT2G30360	34.824	7.87e-55	192

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-3	Eupl05g01931		Pkinase	6.1e-72	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl05g01931	K08269		-	nnu:104601127	1104.74