Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01915 ATGGAGAAGCACTTCCCTCCTCTGCTTCTCATTACAGCAGCACTGCTATTATGCGCCGGATGCACCATGGCGGCAAGGCGCTGTGGAGACTGTGGCTCCACGCCGGTGCCGTACCCACTTAGCACCGGACCCGACTGTGGTGACCAATCCTATAAGATCCGGTGTGTCTCAGGCACACTCCGATTGGACACCCTCAACGGCTCCTCCTACATGATCACATCCATCAACCCGGATATCCAACGGTTCGTCATCCGTCCGGCGAGCTTTGTCGGGAACACCTGCGTTACAACCGATCTTGGAAGCGAAGGAATGCAGCTCAACGAAACCCTCCCCTTCAACGTTACAAGCAGTAACACTATCATGTACCTGAACTGTACCGATTATATACTGCGATCACCGTTGAACTGTACATCAACGAGTCTCTGCCATACATACATAAATGATACAGCGGATGGAACGGCTTGTGACAACGCTCCGAACTGCTGTACATTCAGGGCGGGTGGGTCCACCACTTCGTATAGAATCAGGGTTCGAGATGCCGCGTGCAGGGCGTACCGGAGTTTCGTGAATCTGGACCCTTCGTTGCCGGTGAGTAGGTGGCCGGACCCGGGGGTGGAGTTACAGTGGATGTCGCCGCAGGAGCCAATATGTGAATCGCAGACGGATTGCGAATCAGGGTCGAATTCGACTTGTGCGCCGGACCCAGCAATTGTTGGACAGAGTAGGTGCTTTTGCAATGCCGGATACCGGTGGGATCCCATCGACGGAATCTGTGCCGACAATGTGACGTGTCAAATTCCTGGAGGTTGTGATGATTCAACGAACCGGGCCCCTCTCATCGCAGGTTTGACCTCGGGTCTGGGTACAGCGGTAGTCGCAGCCATTGTGGCCATTCTCTTCTACAGACGGCACAGACGGATCAAAGAGGCTCAAGAGCGCTTGACCAGGGAGCGAGAAGAGATTCTAAACGCCAACAATGGTGGCAAGTCCTCTAAGGTCTTCACAGGCAAAGAGATGAAAAAAGCCACTAACAACTTCTCAAAAGATCGACTCCTCGGCTCTGGAGGCTACGGTGAGGTCTTTATGGGCATTCTAGACGATGGCACCATCATAGCTGTGAAGTGCGCTAAGCTCGGGAACACCAAGGGCACTGACCAGGTCCTCAATGAGGTCCGAATCCTCTGCCAGGTGAACCACCGTTGCCTTGTCCGCCTCCTTGGCTGTTGCGTTGAGCTCGAGCAACCCCTCATGGTGTACGAGTACATTTCCAATGGGGATCTCTTCGAGCACCTCCATGGGCTCCACCCAGGCAAACGGTCCCTACTGACTTGGCGTCGGCGCCTCAGCATCGCCCACCAGACCGCCGAGGGTCTAGCCTACCTTCACTCCTCTGCAGTTCCCCCCATATACCATCGAGACGTGAAGTCCAGCAATATACTCCTAGACGACAAGCTCAATGCAAAGGTCTCTGACTTTGGGCTGTCTCGGCTGGCCGAGACCGATCTCAGCCACATCTCCACCTGCGCTCAGGGGACCCTGGGTTATCTTGACCCTGAATACTACAGGAACTACCAGCTAACTGATAAGAGCGATGTTTATAGCTTCGGGGTTGTCTTATTGGAGCTGTTGACTTCACAGAAAGCCATAGACTTCAATAGAGGATCAGACGATGTGAACTTGGCAATTTACGTTCAACGGAAGGTGGACGAGGAGGATTTAATGGGCACAGTCGATCCGATGCTCATGGAGGGAGCCAACAAGATTGAATTGGAGACCATGAAGGCATTGGGGTTTCTAGCATTGGGTTGCTTGGAGGAGCGCAGACAGAACCGGCCTTCAATGAAAGAAGTTACAGAGGAAATTGAGTACATTATGAGTATTGAGTTAGCTGGGGAGTCGGAGACTTAG 1908 0.533 MEKHFPPLLLITAALLLCAGCTMAARRCGDCGSTPVPYPLSTGPDCGDQSYKIRCVSGTLRLDTLNGSSYMITSINPDIQRFVIRPASFVGNTCVTTDLGSEGMQLNETLPFNVTSSNTIMYLNCTDYILRSPLNCTSTSLCHTYINDTADGTACDNAPNCCTFRAGGSTTSYRIRVRDAACRAYRSFVNLDPSLPVSRWPDPGVELQWMSPQEPICESQTDCESGSNSTCAPDPAIVGQSRCFCNAGYRWDPIDGICADNVTCQIPGGCDDSTNRAPLIAGLTSGLGTAVVAAIVAILFYRRHRRIKEAQERLTREREEILNANNGGKSSKVFTGKEMKKATNNFSKDRLLGSGGYGEVFMGILDDGTIIAVKCAKLGNTKGTDQVLNEVRILCQVNHRCLVRLLGCCVELEQPLMVYEYISNGDLFEHLHGLHPGKRSLLTWRRRLSIAHQTAEGLAYLHSSAVPPIYHRDVKSSNILLDDKLNAKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFNRGSDDVNLAIYVQRKVDEEDLMGTVDPMLMEGANKIELETMKALGFLALGCLEERRQNRPSMKEVTEEIEYIMSIELAGESET* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01915 635 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Eupl05g01915 635 CDD STKc_IRAK 352 622 - -
Eupl05g01915 635 SUPERFAMILY Protein kinase-like (PK-like) 329 621 IPR011009 -
Eupl05g01915 635 Coils Coil 304 327 - -
Eupl05g01915 635 Gene3D Phosphorylase Kinase; domain 1 317 421 - -
Eupl05g01915 635 SMART serkin_6 346 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01915 635 FunFam Wall-associated receptor kinase-like 20 422 634 - -
Eupl05g01915 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Eupl05g01915 635 ProSiteProfiles Protein kinase domain profile. 346 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01915 635 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 624 IPR045274 GO:0007166
Eupl05g01915 635 Pfam Protein kinase domain 347 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01915 635 Gene3D Transferase(Phosphotransferase) domain 1 422 632 - -
Eupl05g01915 635 FunFam Wall-associated receptor kinase-like 20 308 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01915 Eupl-Chr5 44528144 44530337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01915 5 635 Receptor kinase-like Gene Family AT5G02070 54.434 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Eupl05g01915 Pkinase 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01915 - - nnu:104601117 1021.54