Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01912 ATGGGGACAACTGCCTTGAGGCAGCTATTGAGGAGTCTTTGCCACAATTCGCAGTGGAAGTATGCAGTCTTTTGGAAGCTTAAGCACCAGAACCGAATGCTTTTGACCTGGGAGGATGGGTACTGTGATTATCCAAAACCAAGAGAGCCTCTGGAAGGTATGTCAGACAATGTTTATTCCAGTGAGACGACTGGGATTACTTCTTTTGACTGTGACATCAGTGCATACAATGGATGTTCTGTGGGATACTCAATCAGACTGGCAGTGGCGAGTATGTCATGTCTTCTATACTCATTTGGAGAGGGGGTTGTCGGGAGAGTGGCATCTGCAGGGAAGCATTGCTGGGTTTTCACTGATAAAATTAACTCCGAGTTACTTCCTGAGTATTCGGATGAATGGCAACTCCAGTTTGCAGCAGGTATCAAGACTATTTTGCTTGTACCTGTAGTTCCGCATGGGGTCGTGCAACTTGGCTCATTGGAAACGGTCACTGAAGATCCGATGCTAGTGGCTCAAATCAAGGATACGTTCAACACACTTCAACATGTTCCAGGGCCATCTATGCCTTTGAACTCAAGCAGGGATCTCCTAAGTCCACCACCATCGTTGCTGACATCACTTCTCCTGGAGAACTTAGCTGAACCATCATCTACGTCCGGTAATCTGCTGATTCCAATCCAGTCAGAAATAATGTTGAGGAAGGATCCAATGGCACTTGATGGTATCCAAATAACAAAGAATAGTCAGTCACCCACAAGTGTTCACATCATGTCACAGTTAATGGGTCAAGATAATCTTCTGGTCCAAGGAAAAAAGATGCAGCATATTCTAGGTAGTGTTAGGGATGCTGAGTTGGGTGCTCTATCAGTGGGTCCCTCTGAATTACCATTTCCACAAAATCAGTTTACAAATGCTAACCATTTGAAGATGATGGGGAGTAATGTACCCAACTTTTCTTGTCTGGAGGAAGATTTACGGGCCTCTTTTCAATGTAATCTTACCCAACTAGGATTTGAAGCACACACTAACATGAGTATGAACTGTAGCTCTTCTGATTATATGATGGATCAATCATTTGGAGACAAGATTGGTGAGAGCGATCATAAAAGTGTCTGCGGCTTTTTAAGTTTTCCCGCTGACTCTGAGCTACACAAAGCACTTGGTCCATCTTTCCAGCAAGAGTGCGATGAATATCTGTGGGACCCAACTGTTTTAGGTGAAGATGTATGTAGCAGCTCGAGTCTGATCTGCCATACAGAACTCACCAGGGGTATCAAGCCATTGGTTGGGGAACCCAGTGGATTGTTCGTGAAAGGAGATGATGTAGAAAATCTCTTGGATGCAGTAGTTGCCAATGTACACAGTGCTTCAGATGATACTGCATCAATTAGATCCAACAGTGTCAGATCTCCAACTATCTCATCGGGACAGTTTGCTGCTTCCTGCCAAACACAGAATCAGTCTGGATGCAGTGCCTTGTTAGGAGATGATTCGGGTCCATGGAGCTATGTGAGGTCTGCTTTTGCCTCCGGAAGCGAAAATGTTCTTTCAAGTTCTCCATCTGGGTCTTCATTGAAGACCATGGTGAGCACGTTGATCAAAGACGAGCAGCAGAAAAAGGGATTTGGGAATATGCTATCCAGGAGGGGTGCCAAGTTATCACATATTGGCAAAAGAAGGGCCAAACCTGGTGACGTTCAAAGGCCAAGGCCAAGGGACAGACAGATGATTCAAGATCGGGTTAAAGAGCTACGAGAGCTTGTCCCGAATGGTGCAAAGTGTAGCATCGATGCTCTATTAGACCGAACCGTAAAGCACATGCTATTCCTAAGAAGTGTTACCAACCAAGCTGAGAAGTTAAAGCAGTGTGTTTATCCAAAGGTTGATAGAAAGAAACCAGAAACCTCTGAAACACAGGATCACCAGAATGGCGCAAGCTGGGCTTTTGAACTGGGAAGCCAAATTGGAGTGTGCCCTATAGTTGTTGAAGACCTTGACCACCCTGGACGAATGCTCATAGAGATGCTATGCGAAGAACAAGGGCTTTTCTTGGAAATCGCCAAGGTGATCCGACATTTAGAGTTGACTATCTTGAAAGGGGTAATGGAAAACCGTTCTGACAAAATATGGGCTCACTTCATCGTTGAGGCTTCAAGAGGCTTCCAGCGAATGACAATCTTCTGGCCCCTGATGCAGCTATTGCAGCGGAACAATCCCGCCCCAAGCATGCCCTAA 2235 0.4541 MGTTALRQLLRSLCHNSQWKYAVFWKLKHQNRMLLTWEDGYCDYPKPREPLEGMSDNVYSSETTGITSFDCDISAYNGCSVGYSIRLAVASMSCLLYSFGEGVVGRVASAGKHCWVFTDKINSELLPEYSDEWQLQFAAGIKTILLVPVVPHGVVQLGSLETVTEDPMLVAQIKDTFNTLQHVPGPSMPLNSSRDLLSPPPSLLTSLLLENLAEPSSTSGNLLIPIQSEIMLRKDPMALDGIQITKNSQSPTSVHIMSQLMGQDNLLVQGKKMQHILGSVRDAELGALSVGPSELPFPQNQFTNANHLKMMGSNVPNFSCLEEDLRASFQCNLTQLGFEAHTNMSMNCSSSDYMMDQSFGDKIGESDHKSVCGFLSFPADSELHKALGPSFQQECDEYLWDPTVLGEDVCSSSSLICHTELTRGIKPLVGEPSGLFVKGDDVENLLDAVVANVHSASDDTASIRSNSVRSPTISSGQFAASCQTQNQSGCSALLGDDSGPWSYVRSAFASGSENVLSSSPSGSSLKTMVSTLIKDEQQKKGFGNMLSRRGAKLSHIGKRRAKPGDVQRPRPRDRQMIQDRVKELRELVPNGAKCSIDALLDRTVKHMLFLRSVTNQAEKLKQCVYPKVDRKKPETSETQDHQNGASWAFELGSQIGVCPIVVEDLDHPGRMLIEMLCEEQGLFLEIAKVIRHLELTILKGVMENRSDKIWAHFIVEASRGFQRMTIFWPLMQLLQRNNPAPSMP* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01912 744 MobiDBLite consensus disorder prediction 558 575 - -
Eupl05g01912 744 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 561 610 IPR011598 GO:0046983
Eupl05g01912 744 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 177 IPR025610 -
Eupl05g01912 744 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 364 739 IPR043561 GO:0003700|GO:0006355
Eupl05g01912 744 MobiDBLite consensus disorder prediction 551 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01912 Eupl-Chr5 44472564 44481870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01912 433 736 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 43.354 1.35e-62 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01912 - - nnu:104597098 768.844