Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01907 ATGTATACGGCTAGGAGGAAAATCCAAAAGGACAAGGGTGCGGAGCCTACCGAGTTTGAGGACTCGGTTGCGCAGTCCTTCTTTGATTTGGAGAACACCAATCAGGAGCTCAAAAGCGAATTGAAAGACCTCTACATAAATTCAGCAGTACAAATAGATGTTTCTGGGAATCGGAAGGCTGTCGTAATTCATGTCCCTTATAGACTGAGGAAAGGATTTCGGAAAATTCATGTGAGGCTTGTGCGGGAGTTGGAGAAGAAGTTCAGTGGGAAGGATGTGATCTTGATTGCCACCAGAAGGATTGTGAGACCACCAAAGAAGGGCTCTGCCGTTGTGCGCCCTCGCAGCCGCACACTCACTGCAGTTCATGATGCCATGTTGGAGGATGTTGTGTACCCTGCAGAGATTGTTGGAAAGCGTATTAGGTACCGAATTGATGGCTCCAAGATTATCAAGGTGAGGAAACCTTATGATTTGTCAGAAAATGCTCTTGCAGATAAGTCTGCCTCCCTCATTTCCTTAGCCTTGCTGCTCCTCATCGATCTTGATTTGAACACTAGTCGGAAATTAGTTTTTTCATGTTTCAAGAATTTGTTTATATTGGAACTTCTTTAG 615 0.4472 MYTARRKIQKDKGAEPTEFEDSVAQSFFDLENTNQELKSELKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAVVRPRSRTLTAVHDAMLEDVVYPAEIVGKRIRYRIDGSKIIKVRKPYDLSENALADKSASLISLALLLLIDLDLNTSRKLVFSCFKNLFILELL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01907 204 PANTHER 40S RIBOSOMAL PROTEIN S7 1 155 IPR000554 GO:0003735|GO:0005840|GO:0006412
Eupl05g01907 204 Pfam Ribosomal protein S7e 7 154 IPR000554 GO:0003735|GO:0005840|GO:0006412
Eupl05g01907 204 Coils Coil 27 47 - -
Eupl05g01907 204 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01907 Eupl-Chr5 44412865 44415473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01907 1 153 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.739 2.12e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01907 K02993 - nnu:104602332 282.722