Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01895 ATGACAGGTGCATCATGTGGAGCATGCAAGTTCTTGAGAAGAAAATGTAACAATGGATGTGTTTTTGCTCCTTATTTCTGTTACGATCAGGGTTCAACTCATTTCGCGGCGGTTCACAAGGTCTTTGGAGCAAGCAATGTCTCCAAGCTACTATCGCACCTCCCGGTGCACAACCGAAGCGAGGCTGCCATCACCATCTCTTACGAAGCGCTAGCGCGAATGCGGGATCCTATATATGGTTGTGTTGCTCACATCTTTGCACTTCAACAACAGGTGACCAATCTACAAGAGGAGATAGAATTTCTCGAGACTCAAGTCGCTTTTCGCGCGACCGATGTTGTTAGTCATCGACGTCCCGAAGTAGTGAACAATTGCAGTAATGGATTTCAATTCTCTTTGCAGCAAGATGACAATGCACACAATTACTGTAATCAACAGGCTCCTCACCCTTCCAATGCAACTGGGTTTCAGGCTTTTAATCAAGAAATAAACATACAACCTCTCCCTCTGTGTAGATGGGAGGACCCCAGCTTGTCAAATGAGCTAAATTTCGCAGAGAGACTCACCATGGGAATGGACCAAGAAATCTTGCCTAGTGACCCATGGTTAGATAATGCCACCTACATTGAGTTCTGA 636 0.456 MTGASCGACKFLRRKCNNGCVFAPYFCYDQGSTHFAAVHKVFGASNVSKLLSHLPVHNRSEAAITISYEALARMRDPIYGCVAHIFALQQQVTNLQEEIEFLETQVAFRATDVVSHRRPEVVNNCSNGFQFSLQQDDNAHNYCNQQAPHPSNATGFQAFNQEINIQPLPLCRWEDPSLSNELNFAERLTMGMDQEILPSDPWLDNATYIEF* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01895 211 Coils Coil 85 105 - -
Eupl05g01895 211 ProSiteProfiles LOB domain profile. 4 106 IPR004883 -
Eupl05g01895 211 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Eupl05g01895 211 PANTHER LOB DOMAIN CONTAINING PROTEIN 3 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01895 Eupl-Chr5 44209671 44210398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01895 3 106 AS2 family AT5G06080 78.846 3.00e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl05g01895 LOB 3.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01895 K13945 - nnu:104601099 258.455