LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl05g01892	ATGACGAAAAATCTCAGATATTTTTGGGTTTTTGTTTTTCTTTCATACCCAGTTTTCGTTTTCTCTACCCAGTCTGAGTTCTTCTACAGTGGATTTAATGGAGAGGGTAAAAACATAAGCTTGGATGGAGTTGCAGAGATCGAGAAAAATGGGATTCTTCGATTAACGAACGAGTCGAGTAGAGTAACCGGCCACGCCTTCTACCCATCTCCTCTGCAGTTCAAGAATTCGACCGACGGGACTGCTTTCTCTTTCTCTACCTCTTTTGCCTTTGCGATTGTTCCTGAGTATCCGAAGCTCGGCGGTCATGGCTTCGCTTTCACTCTCTCTCCAACGAAAGAGCTTAGAGGGGCTCTTCCGAATCAATATCTTGGCTTAATCAACACGAGCGACGTTGGAAACTTCTCCAACCGTTTCTTCGCTGTCGAATTCGACACAGTTAAAGATTTCGAATTTGGGGATATCAACGACAATCATGTTGGGATCGACATCAACAGCTTGAAATCGAACTACTCTGAGCCCGTCGCGTATTTTAGCGATGGTTCGACAAAGCAAGCCCTTAATCTCAGTACTGGCAACACAATTCAGGCGTGGATCGATTACGATTCGGCGACTAATCTTCTCAACGTGACGCTTGCGCCTTCTTCTTCTTCAAAACCCAGCTTGCCAATCCTTTCATTCTACAAAGATCTCTCACCAATCCTCAATGACTCCATGTACGTGGGCTTCTCTTCTTCGACAGGTCTGCTCGCAAGCTCCCATTACATCTTTGGATGGAGCTTCAAGATGAACGGAGCGGCTCGTACACTTGATCTCTCTTCTCTCCCTTCGCTCCCCGCACCGAAGAAGAAACACACGGCCTTGAAAATCGGGGTGTCTGTTTCAGCTGCACTTATTGTCATTACCGCAATCTCCTTGGCTGTCTATCTCTTCTGGAAAATCAAGAACGCAGATGTAATAGAAAAGTGGGAGCTCGACATCGGCCCTCATCGATTCTCCTACGAAGAACTCAAGCTCGCAACAAAGGGTTTCAGAGACAAAGAGCTACTTGGGTTCGGCGGATTTGGTCAAGTTTACAAAGGAATACTACCGAATATGAAAACCCCAGTTGCAGTTAAGCGAATCTCCCACGAATCGAAACAGGGGTTGAGGGAATTCGTATCAGAGATTGCGAGTATCGGTCGTCTTCGTCACAGAAATCTGGTACAATTACAGGGATGGTGTCGTCGAAGAGGCGATTTCCTCCTCGTGTACGATTTCATGCCTAATGGAAGCTTAGATAAGTTACTCTTCGACGAACCCAAATTGATTCTCAGCTGGGAACAGAGGTTCAAGATTATCAAAGGCATAGCTGCAGGTCTACTCTACTTACACGAAGGATGGGAACAGATTGTAATTCACAGAGACATTAAAGCTAGTAACGTGTTAATAGACGGCGAGTTAAACGGACGACTCGGTGATTTCGGACTCGCTAGGTTATACGAGCACGGGTCAAACCCAAGTACAACTCGGGTAGTAGGCACTCTGGGATATCTTGCGCCGGAGTTGACACGGACAGGGAAAGCCACCACGAGCTCTGATGTGTTTGCTTTTGGTGCGGTGTTGCTTGAAGTCACATGCGGGAGAAGACCAATTGAACCCAAAGCGTTGCCTGAAGAGCTGATACTGGTTGATTGGGTATGGGAGAAATGGAGAGAGGAGAGGGTCTTTGATGTGGTGGACCCAAGATTGAATGGTGAGTATGACGAGGGAGAAGTGGTGATGGTTTTGAAATTGGGGTTGATGTGTTCGAACTGTGCGCCTACGGTGCGTCCTAGCATGAGGCAGCTACTAAGGTATTTGGAAGGAGAGGTGAGGATGCCAGAAGTCGTGAGTGCGCCGGGGGAGTACGAAGCAGGGAAGAATGAAGGGTTCGATGATTTTTTACATTCGTATCCGTCTTCCTCTTTTGAGAAGGTAACAACGTATTCGACTATGGGACCTGGAGACGGTGATCTTGAAGCTCCCTCTGCTTCACCTCTCAATCTTCTCTCCGACAGTAGGTAG	2046	0.4717	MTKNLRYFWVFVFLSYPVFVFSTQSEFFYSGFNGEGKNISLDGVAEIEKNGILRLTNESSRVTGHAFYPSPLQFKNSTDGTAFSFSTSFAFAIVPEYPKLGGHGFAFTLSPTKELRGALPNQYLGLINTSDVGNFSNRFFAVEFDTVKDFEFGDINDNHVGIDINSLKSNYSEPVAYFSDGSTKQALNLSTGNTIQAWIDYDSATNLLNVTLAPSSSSKPSLPILSFYKDLSPILNDSMYVGFSSSTGLLASSHYIFGWSFKMNGAARTLDLSSLPSLPAPKKKHTALKIGVSVSAALIVITAISLAVYLFWKIKNADVIEKWELDIGPHRFSYEELKLATKGFRDKELLGFGGFGQVYKGILPNMKTPVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLQGWCRRRGDFLLVYDFMPNGSLDKLLFDEPKLILSWEQRFKIIKGIAAGLLYLHEGWEQIVIHRDIKASNVLIDGELNGRLGDFGLARLYEHGSNPSTTRVVGTLGYLAPELTRTGKATTSSDVFAFGAVLLEVTCGRRPIEPKALPEELILVDWVWEKWREERVFDVVDPRLNGEYDEGEVVMVLKLGLMCSNCAPTVRPSMRQLLRYLEGEVRMPEVVSAPGEYEAGKNEGFDDFLHSYPSSSFEKVTTYSTMGPGDGDLEAPSASPLNLLSDSR*	682

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl05g01892	681	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	465	477	IPR008271	GO:0004672\|GO:0006468
	Eupl05g01892	681	Pfam	Legume lectin domain	25	275	IPR001220	GO:0030246
	Eupl05g01892	681	FunFam	L-type lectin-domain containing receptor kinase S.4	23	269	-	-
	Eupl05g01892	681	Gene3D	Transferase(Phosphotransferase) domain 1	421	628	-	-
	Eupl05g01892	681	FunFam	L-type lectin-domain containing receptor kinase S.1	329	420	-	-
	Eupl05g01892	681	FunFam	L-type lectin-domain containing receptor kinase S.4	421	626	-	-
	Eupl05g01892	681	CDD	STKc_IRAK	350	616	-	-
	Eupl05g01892	681	SMART	serkin_6	344	614	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl05g01892	681	PANTHER	-	32	621	-	-
	Eupl05g01892	681	MobiDBLite	consensus disorder prediction	653	681	-	-
	Eupl05g01892	681	Pfam	Protein kinase domain	345	546	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl05g01892	681	Gene3D	Phosphorylase Kinase; domain 1	329	420	-	-
	Eupl05g01892	681	CDD	lectin_legume_LecRK_Arcelin_ConA	26	265	IPR001220	GO:0030246
	Eupl05g01892	681	SUPERFAMILY	Concanavalin A-like lectins/glucanases	26	283	IPR013320	-
	Eupl05g01892	681	ProSiteProfiles	Protein kinase domain profile.	344	623	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl05g01892	681	SUPERFAMILY	Protein kinase-like (PK-like)	325	626	IPR011009	-
	Eupl05g01892	681	ProSitePatterns	Protein kinases ATP-binding region signature.	350	373	IPR017441	GO:0005524
	Eupl05g01892	681	Gene3D	-	23	264	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl05g01892	Eupl-Chr5	44171801	44174300	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl05g01892	20	640	Receptor kinase-like Gene Family	AT3G55550	62.998	0.0	794

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Eupl05g01892		Pkinase	1.6e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl05g01892	-		-	nnu:104601095	1041.95