Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01889 ATGGAGAGCCTACTCTGCGACGAGGATTGGCTTAGAAGTCCTCCTTCGCACGAGCGCAAGTTAGAGAGCAGCATTGATTTATTCTACACCACGAGAGAAGACTGCGAGAATGCTCTCATGGTTTGCTTGCAGAAGGATGTTAGTTACATGCCAGAAGCTGGATATACCCATCGTCTTCAGTCGTCCCATTTGTTTTATGCTAGGATCAGAGCCATACAATGGTTTATCAAGTCTCGTCGTCGGTTGAATCTCTCTTTTAAGACTGTGTTTGATGCTGCAAATCACCTGGATCGCTTTATTTCTATGAACCATTGCAGTAAATGGAAATATTGGATGATTGAATTACTATCTGTGTCATGTTTATCAATTGCTGTCAAGTTTGGTGAAGTCTCCATACCTCCATTGCACGAACTTCAGCTGGAGGATCTGGACGGTTCATTTCAATCGAGCACAATCCAGCAGATGGAATTGACAGTCTTGAAGGCATTGGGATGGCGGGTCGGCTCCATAACGCCTTACTCTTACCTGGAATTGCTAATGGGGCACCTGGATTCTCTCCAACCTCACCTTCGCTGCAACATAACTTCTCGTGTTACCGAGTTGCTTCTCGGCACTCTTTCAGATCCCAAATTCCTTGAGTTCAGGCCATGCACGGTTACGGTATCAGCACTAAGATGTAGTCTAGAGGAATTATTTCCATCAAAATGTGACGCTAATCTCTCCAATCTTATCAATCTTATCCCTGATCAAACGGACAATATAAACAGCTGTCACAAAATCATGGAAGAGCGAGTGGCGGACCCATTATATAGTTTAATCGCTTACGGGCACTCCTACTGCCCATCCAGTCCTCTGACAGTAATTACAATGGAGCGAAACGATATATATGATTGCTACATCGATCTCTCTCTCTTCAAAGTGTCTGGTTCGAATGAGAACTTCCCATCAAATCCAAAGAAGCGGAAGAGGGAAGAGGATACATTAAGCAACATCACAAATTCAGTTACAATTGGTGTCACATTTCGTGATCCATCGATGTCGCAGTGTCCGTAA 1053 0.4406 MESLLCDEDWLRSPPSHERKLESSIDLFYTTREDCENALMVCLQKDVSYMPEAGYTHRLQSSHLFYARIRAIQWFIKSRRRLNLSFKTVFDAANHLDRFISMNHCSKWKYWMIELLSVSCLSIAVKFGEVSIPPLHELQLEDLDGSFQSSTIQQMELTVLKALGWRVGSITPYSYLELLMGHLDSLQPHLRCNITSRVTELLLGTLSDPKFLEFRPCTVTVSALRCSLEELFPSKCDANLSNLINLIPDQTDNINSCHKIMEERVADPLYSLIAYGHSYCPSSPLTVITMERNDIYDCYIDLSLFKVSGSNENFPSNPKKRKREEDTLSNITNSVTIGVTFRDPSMSQCP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01889 350 Gene3D - 42 258 - -
Eupl05g01889 350 Gene3D - 52 168 - -
Eupl05g01889 350 PANTHER CYCLINS 25 266 IPR039361 -
Eupl05g01889 350 CDD CYCLIN_AtCycD-like_rpt2 170 261 - -
Eupl05g01889 350 SUPERFAMILY Cyclin-like 31 167 IPR036915 -
Eupl05g01889 350 Pfam Cyclin, C-terminal domain 170 265 IPR004367 -
Eupl05g01889 350 Pfam Cyclin, N-terminal domain 44 167 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01889 Eupl-Chr5 44089998 44092246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01889 4 245 Core Cell Cycle Gene Families AT1G70210 29.918 8.71e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01889 K18813 - nnu:104597136 376.326