Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01885 ATGCATGGCATCTCTCTCTCTCTAACAACAACAAAACTCCTCTCTTTATCCTCTCTCTCTTGCCCATCTCTTCTTCCTCGCCGTTGTCATCTCTACCTGCGAAGGCAATCAAAATTATCAATACCCATTTGCAGATATGGCCATGGGAGTGATCTCAAGCTTATTGTGTTTGCTCCTCGTTCATATTCACCCATTTATGAGAAGAAGAAAAATAAGAGAAATAGTAAAACCCTCTTGAGAGCAAACGGTAGAGAGTCTCCATACGAAGTCTTGGGCGTTTCGCCCTCCGCAAGTCATGAAGAAATCAAGAGAGCTTACCGGAAACTCGCTCTTAAATTCCACCCAGATGTCAACAAAGAGACAAATGCCCAGGAGAAATTCATGAGGATCAAACATGCATACACTGCGTTGCTGAACTCAGAATCTAGGCGTAATGATTTTGGAAGTCGTACATCTGATTATTCCAGTTCTACAGCTGAAAGAAACCAAAGAAAGAATGCACAAGATGATGAAGAGTTCTACGGATTTGGTAACTTTTTGAGGGATGCTCGAATAACAATAGAGGACTTCTTTAGGGACCTCCAAGCAGAATTCCAGACTGGGGAAGGTAGTGCTGGTTCACAAGGGAAGCCCAAGAGCTTGTGGGAGGAATTAGCGGACATTGGTGAAGAATTTGTGGAGTATCTAGAGAAAGAGCTCAACATCACTGATCCAAATGTCAAAGCAGAAAAAAACAATGAAGGGCCTTCAAAGGGGAACTCGTATGAAAAATCGAGGTCGGAGAGAAGGGGAGCTGATTTTCGAAACAATGCTGGAAAGGAGAGCAGTATTGGAGATAATGTGGATGAGATTGAAGCTACTCTTACTCAGCTGAAAAAGGAATTGGGACTCTAG 894 0.4295 MHGISLSLTTTKLLSLSSLSCPSLLPRRCHLYLRRQSKLSIPICRYGHGSDLKLIVFAPRSYSPIYEKKKNKRNSKTLLRANGRESPYEVLGVSPSASHEEIKRAYRKLALKFHPDVNKETNAQEKFMRIKHAYTALLNSESRRNDFGSRTSDYSSSTAERNQRKNAQDDEEFYGFGNFLRDARITIEDFFRDLQAEFQTGEGSAGSQGKPKSLWEELADIGEEFVEYLEKELNITDPNVKAEKNNEGPSKGNSYEKSRSERRGADFRNNAGKESSIGDNVDEIEATLTQLKKELGL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01885 297 CDD DnaJ 87 139 IPR001623 -
Eupl05g01885 297 MobiDBLite consensus disorder prediction 239 281 - -
Eupl05g01885 297 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 54 249 - -
Eupl05g01885 297 PRINTS DnaJ domain signature 122 142 IPR001623 -
Eupl05g01885 297 PRINTS DnaJ domain signature 88 106 IPR001623 -
Eupl05g01885 297 PRINTS DnaJ domain signature 106 121 IPR001623 -
Eupl05g01885 297 SMART dnaj_3 85 142 IPR001623 -
Eupl05g01885 297 SUPERFAMILY Chaperone J-domain 73 144 IPR036869 -
Eupl05g01885 297 MobiDBLite consensus disorder prediction 254 269 - -
Eupl05g01885 297 MobiDBLite consensus disorder prediction 145 162 - -
Eupl05g01885 297 Pfam DnaJ domain 87 145 IPR001623 -
Eupl05g01885 297 ProSiteProfiles dnaJ domain profile. 86 148 IPR001623 -
Eupl05g01885 297 Gene3D DnaJ domain 83 207 IPR036869 -
Eupl05g01885 297 MobiDBLite consensus disorder prediction 145 170 - -
Eupl05g01885 297 MobiDBLite consensus disorder prediction 239 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01885 Eupl-Chr5 44066891 44077076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01885 88 143 C2H2 Transcription Factor Family AT1G74250 40.323 3.75e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01885 - - ming:122089173 355.91