Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl05g01878 | ATGGGGGAAGAAGTGCGGATGAGCGACTACGAAGGCGGTGTTGGCGGTGGAGATGAGGAACGAGTATTCGAGTGGGAGGTTGGGTTGCCGACCGCAGACGATCTCACCCCCTTGTCTCAGCTTTTGCTCCCACCGGAGCTCGCGTGTGCTTTCAGTATAACCCCCGAGCCTCGTCGAAGCCTTCTCGATGTGAATCGTGCGTCGCAGAACACGCTATCCAGTCTCCGTCGACAGATTCCGACCATCTCTTCCAACAATCATAACTCTTTGCCTGCTTTCACCGAGGATCGAACCCAGGACCCATCGGTCGTCCAAGGGGATGAATTTGACCCCGGGACTTTTACCAAAGATGGGTCGGAAACACGCAAGATTCGGAGAATGGAGAACGCTGAGGAGGCTGATTCGGTCTTGCGGATGGAGAATTCCAATGATGATCATTCTGCCCGGACCCAGAAACGGACCCGATTGGTGTGGACGCCCCAGCTTCATAAGCGGTTTGTGGATGTCGTCGCACATTTAGGTATTAAGAACGCTGTTCCGAAGACCATCATGCAGCTGATGAACGTGGAGGGCCTGACAAGAGAGAACGTCGCCAGCCATCTTCAGAAGTATCGGTTGTACCTGAAGAGGATGCAAGGATTGTCGAACGAGGGTCCATCCTCCTCTGACCAACTTTTTGCATCGACCCCTGTTCCGCAGAGCCTACATGACTCCAACGGGAATGGACATATGGCATATGAGGCGGCCTTGCTACCTACGCCGGTTCTTGGTGTGGTCCCCGGTCATGGCCATATGGGGATTCCAGTTGGTAATCCATCCGCCGTCTCCTATCATGGTTTCGAGTCTCATCCCTATAACATGTTTAGTGAACAGCAGAGAGATTGGTCTGGTATTGTGTCATATCCCCATGTTACGCCTAATGATAAATAA | 930 | 0.528 | MGEEVRMSDYEGGVGGGDEERVFEWEVGLPTADDLTPLSQLLLPPELACAFSITPEPRRSLLDVNRASQNTLSSLRRQIPTISSNNHNSLPAFTEDRTQDPSVVQGDEFDPGTFTKDGSETRKIRRMENAEEADSVLRMENSNDDHSARTQKRTRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSNGNGHMAYEAALLPTPVLGVVPGHGHMGIPVGNPSAVSYHGFESHPYNMFSEQQRDWSGIVSYPHVTPNDK* | 310 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl05g01878 | 309 | MobiDBLite | consensus disorder prediction | 81 | 118 | - | - | |
Eupl05g01878 | 309 | SUPERFAMILY | Homeodomain-like | 150 | 210 | IPR009057 | - | |
Eupl05g01878 | 309 | MobiDBLite | consensus disorder prediction | 81 | 100 | - | - | |
Eupl05g01878 | 309 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 150 | 209 | IPR017930 | - | |
Eupl05g01878 | 309 | Pfam | Myb-like DNA-binding domain | 157 | 205 | IPR001005 | - | |
Eupl05g01878 | 309 | Gene3D | - | 149 | 212 | - | - | |
Eupl05g01878 | 309 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 8 | 283 | IPR044841 | GO:0003700|GO:0006355 | |
Eupl05g01878 | 309 | MobiDBLite | consensus disorder prediction | 218 | 240 | - | - | |
Eupl05g01878 | 309 | FunFam | Two-component response regulator | 149 | 212 | - | - | |
Eupl05g01878 | 309 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 154 | 206 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl05g01878 | Eupl-Chr5 | 44023612 | 44025313 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl05g01878 | 1 | 237 | G2-like Transcription Factor Family | AT3G46640 | 59.671 | 1.84e-83 | 253 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Eupl05g01878 | Myb_DNA-binding | 1.2e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl05g01878 | - | - | nnu:104597142 | 459.144 |