Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01867 ATGAGTTTTGTTTTCCGAGGGACTAGAGCAGATATAGAAACTGGATTTCCAGGATTTATTCCTGAACGGCGTGCAGTGCGTGTTCATGCAGCTAGACCAGTTAATACCAACTCATTGGCTTTTCTTGTCACGGTTCTTTTGCTGTTCATGATACTAAACTCACACCAGATGTCACCAAACTTTCTGCTTTGGCTAGTTCTTGGTGTCTTTTTAATGGCCACAAGCCTTAGAATGTATGCAACTTGCCAACAACTTCAAGCTCAGGCCCAAGCTCATGCTGCTGCAGCAAGTGGCCTGCTTGGTCATACTGAGCTGCGGTTGCATATGCCACCATCCATAGCCTTTGCAACAAGAGGGCGATTACAAGGGCTCAGGCTCCAGCTTGCACTTCTTGACCGGGAATTTGATGATCTAGATTATGAAACTCTCAGGGCACTGGATTCTGATAATGCTTCCACTGCTCCTTCAATGAGTGAGGAAGAAATAAATGCCCTTCCTGTTCACAAATACAAGGTCACTGGCCCACAAAGTGATGGCTCATCCCTGCAACAGGCCTCATCTTCTTCTGCCGCAGCTGAGCAAAAAAAGCAAGACCCGGTGAAGGCAGATGCAAATATGAAGGCCCCAGAAGATGAACTGATGTGCAGCGTTTGCTTGGAGCAAGTCAATGTGGGAGAAGTCATCCGTAGCCTGCCATGCTTGCATCAGTTCCATGCTACTTGCATCGACCCATGGCTGCGGCAACAGGGGACCTGCCCTGTATGTAAATATAGAGCAGGTTCAGAATGGCAGGAAAATGGGGAGGGCGGAATGGATGCTTCTTATATGATTAAGTTGCAGAACGTGACACGACTGTGCCACACGAAGAGCATTGTGACGGTAAATGGACAGTTTCCGGGGCCTCGGATCGTTGCAAGGGAAGGTGATCGGGTGGTTGTTAAGGTGGTCAACCATGTTCAGAACAATATCACCATCCATTGGCATGGAATTCGACAACTTCAGAGTGGATGGGCGGATGGACCTGCATATGTGACTCAGTGCCCCATACAGACTGGTCAGACCTATGTGTACAACTTCACCATTATCGGACAGAGAGGGACATTGTTCTGGCATGCCCACATTTCATGGCTTAGGTCTACGATTTATGGACCCCTCGTCATCCTCCCCAAGCGCAACGTCCCTTACCCGTTCGCCAAACCCTATAAGGAAGTCCCCATCATCTTCGGAGAGTGGTTTAATGCAGACACAGAGGCAATCATCAGCCAGGCTCTACAGACTGGAGGGGGGCCGAATGTCTCCGAAGCCTATACCATGAATGGACTTCCGGGGCTCTTGTACAACTGCTCAGCAAAAGGTGTATGGTTCATGCATTGCCACCTAGAAGTCCACACCAGCTGGGGGTTGAAGATGGCGTGGGTCGTCTTGGATGGGAAGCTCCCAAATCAGAAGCTACTGCCTCCACCGTCTGATCTTCCGAAGTGCTGA 1485 0.4956 MSFVFRGTRADIETGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATSLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIAFATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNASTAPSMSEEEINALPVHKYKVTGPQSDGSSLQQASSSSAAAEQKKQDPVKADANMKAPEDELMCSVCLEQVNVGEVIRSLPCLHQFHATCIDPWLRQQGTCPVCKYRAGSEWQENGEGGMDASYMIKLQNVTRLCHTKSIVTVNGQFPGPRIVAREGDRVVVKVVNHVQNNITIHWHGIRQLQSGWADGPAYVTQCPIQTGQTYVYNFTIIGQRGTLFWHAHISWLRSTIYGPLVILPKRNVPYPFAKPYKEVPIIFGEWFNADTEAIISQALQTGGGPNVSEAYTMNGLPGLLYNCSAKGVWFMHCHLEVHTSWGLKMAWVVLDGKLPNQKLLPPPSDLPKC* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01867 494 Gene3D - 444 494 IPR008972 -
Eupl05g01867 494 ProSiteProfiles Zinc finger RING-type profile. 215 256 IPR001841 -
Eupl05g01867 494 FunFam Laccase 265 389 - -
Eupl05g01867 494 CDD CuRO_1_LCC_plant 275 389 IPR034288 GO:0005507
Eupl05g01867 494 Pfam Multicopper oxidase 450 476 IPR011706 GO:0005507|GO:0016491
Eupl05g01867 494 ProSitePatterns Multicopper oxidases signature 2. 457 468 IPR002355 GO:0005507
Eupl05g01867 494 ProSitePatterns Multicopper oxidases signature 1. 452 472 IPR033138 -
Eupl05g01867 494 SUPERFAMILY Cupredoxins 281 419 IPR008972 -
Eupl05g01867 494 SUPERFAMILY Cupredoxins 399 494 IPR008972 -
Eupl05g01867 494 SUPERFAMILY RING/U-box 210 259 - -
Eupl05g01867 494 CDD RING-H2_PA-TM-RING 215 256 - -
Eupl05g01867 494 SMART ring_2 215 255 IPR001841 -
Eupl05g01867 494 MobiDBLite consensus disorder prediction 174 194 - -
Eupl05g01867 494 PANTHER TARGET OF ERK KINASE MPK-1 1 263 - -
Eupl05g01867 494 MobiDBLite consensus disorder prediction 173 202 - -
Eupl05g01867 494 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 256 IPR013083 -
Eupl05g01867 494 Gene3D - 257 389 IPR008972 -
Eupl05g01867 494 Pfam Ring finger domain 214 256 IPR001841 -
Eupl05g01867 494 Pfam Multicopper oxidase 279 390 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01867 Eupl-Chr5 43893234 43904464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01867 1 277 C3H Transcription Factor Family AT3G55530 77.698 1.12e-141 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01867 K16283 - ming:122087563 436.802