Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01858 ATGGAGGAATTAAAGGGTAATTGGTCCGATGGTTTGGAAGATGATGAGCTCGTACGAGAGCTTCTTGACAATGATTCCCCTTTCTTTTTGTTACCGGAAATCATTGAAGATGAAGCAATTACTCTTTCTCCCGAACCGACTATGTCGTCCGAGCTTCTTACAAACCGTCTAGTCTCGAAAGTCTACTCGGGACCGACGATCAACGATATCGAAAGTGCATTATCCATAACAAAGCCGAATAAAGAATCTGGTGACTGGAGCATTTCACGAGCAGGAATTTCGATCCTAGAGAAGGGGTTGGGTAAGTTAGACCATAAGTATACTCTGAAAATCAAGAGTTGTGAGAATGGAATGGCAAATGACGGTTATAAATGGAGAAAATATGGGCAGAAATCAATCAAAAATAGCCCGAATCCAAGGAGTTATTATAGGTGCACAAATCCAAGGTGCAGCGCAAAGAAGCAGGTGGAGCGGTCGGTTGAGGACCCGGACACGCTTATCATCACATACGAAGGGCTCCACCTGCACTTCGCCTACTCTCATTTCCTACTAAGCCAACTCCACCACGCCAACTCACCCATCAAAAAGTCCAAGAAAAGCAGTTCAGAAGTCCAAGCCCAAGACGAACAAGAAAGCCAAGCCCAGGAAAGTCCTGCAGTGGGTCCTACTCCTACCCACTTAAGCCCAGTTATAGTTGGGCCTCAGCAAGAGCCATTGAAAGGAATGGGCCCACAGGGATTACTTGAAGATGTAGTACCTCTAATGATTCGGAATCCATATTTGTCAAATTCCTCTTGCTCATCTTCTTACTCATATTCTCCTCCTACTTCCTCTTCGTCACTATCTTGGTCTCCTAACTAA 861 0.4495 MEELKGNWSDGLEDDELVRELLDNDSPFFLLPEIIEDEAITLSPEPTMSSELLTNRLVSKVYSGPTINDIESALSITKPNKESGDWSISRAGISILEKGLGKLDHKYTLKIKSCENGMANDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSVEDPDTLIITYEGLHLHFAYSHFLLSQLHHANSPIKKSKKSSSEVQAQDEQESQAQESPAVGPTPTHLSPVIVGPQQEPLKGMGPQGLLEDVVPLMIRNPYLSNSSCSSSYSYSPPTSSSSLSWSPN* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01858 286 FunFam WRKY transcription factor 109 179 - -
Eupl05g01858 286 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 104 210 IPR044810 GO:0003700
Eupl05g01858 286 SMART WRKY_cls 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g01858 286 MobiDBLite consensus disorder prediction 206 222 - -
Eupl05g01858 286 MobiDBLite consensus disorder prediction 194 245 - -
Eupl05g01858 286 Gene3D WRKY domain 107 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g01858 286 SUPERFAMILY WRKY DNA-binding domain 115 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g01858 286 MobiDBLite consensus disorder prediction 262 286 - -
Eupl05g01858 286 ProSiteProfiles WRKY domain profile. 114 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g01858 286 Pfam WRKY DNA -binding domain 120 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01858 Eupl-Chr5 43750700 43754729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01858 1 258 WRKY Transcription Factor Family AT5G43290 39.781 7.39e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl05g01858 WRKY 2.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01858 - - nnu:104597162 281.952