Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01843 ATGGTTATGGATCCACGTCTAAGAGGATTCTCCGATTCCACAAACGGATTAAAATTCAACGATGATTCTGTTTCCTATCAGAACCTTGTGAACGCATTAAAACTCGAAGAGACCTTTCTAGATCATAACTTCATGGATCATCCTCTCCTTCCACCCGATCCAAACACTAATAGTCTTGCTCCATCTTCAAGCGTGAGCCCTGAGGAAGATTCTCCTGAAGACTGCGACTTCTCCGATATAGTTCTCAAGTACATAAGCCAGATGCTTATGGAAGAAGACATGGAGGAGAAGAGCTGCATGTTCCAGGAGTCTTCAGCTCTTCAAGCCGCAGAAAAACCCTTTTATGAGATCCTTGGGGAGAAGTATCCTCCTCCACCCAATCGGCCCTCTCTTTATGTAGATCAGAATGCCGAGAGTCCAGTTGATAATTTTAATGGCAATTACAGTAACTATACCAGCAGTAGCAGTACTAGTACTAGTAATAACATAGTAGATACCAGCTGGGCTAGTGATCTTGTTGAGTACAAGTCGTCTCAGATACAGACAATTCCTATTGAATACATTTCCCAGTCCAGTTCTCAGTCATCTTTCAGCTCTTCAAACAGCATCAACAACTTCGTAGATGGGTTGGTGGAGTCTCCTGTAAGTATTGTTAGCATTCCTGATTTATTTAGTGAGAGCCAACCTGCTTGGCAGTTCAGGAGAGGAGTTGAAGAAGCTAGCAAGTTCCTTCCAAATGGTAATAATCTTATTCGTCATCTGGAGAGCAATGGATTATTACCACAGGAACCAAAGAAAGAGGCCGGTGAGGTTGTGGTCAAGGTGGAGAAGGACGAGAGAGAGCACTCACCAAATGGGTCGAGGGGAAAGAAGAATCTGCATCGCGAGGATATTGATTTAGAAGAAGGGAGAAGTAACAAGCAGTCAGCGGTTTTTGCCGAAGAAACCGTGCGATCAGAGATGTTCGATATGGTGTTGCTCTGTACCGGCAAAGGTGCGAATGCTGTGTCTACTCTCCGCGAAGCCTTGCAGACTGAAGCAAGCAAGAATGTGCAGCAGAATGGCCAGTTGAAAGGATCTAATGGTGGAAAGTCTCGTGGTAAGAAACAGAGCGGTAAAAGGGAAGTGGTGGATTTGAGGACTCTCCTGATTCACTGTGCCCAAGCTGTCGCAGCCGATGACCGGAGGAGCGCGAATGAACTACTGAAGCAGATCAGGCAGCACTCTTCCCCTTTCGGGGATGGGACTCAGAGGTTAGCCCATTGCTTTGCGGATGGTCTTGAGGCACGCTTGGCTGGCACTGGGAGCCAGATTTACACGGCCCTCATTACCAAGAGAACATCAGCTGCGGATATCTTGAAAGCTTACCAACTATATCTCGCGGCATGCCCATTCAAGAAGCTGTCAAATTTCTTCTCAAACCAGACGATTATGAATCTGGCTGAGAATGCAACAAGACTCCACATTATCGATTTTGGTATTCTCTATGGTTTCCAGTGGCCCTGCCTTTTCCAGCGACTCTCAGCAAGACCTGGTGGGCCCCCTAAGCTTCGAATTACTGGGATAGATTTTCCCCAACCTGGTTTCCGGCCTTCCGAGAGAGTTGAAGAAACTGGACGTCGCTTGGCAAATTATGCCGAGAGTTTCAATGTTCCATTTGAGTACAATGCCATCGCTGTGAAATGGGAAACCATTCAAATTGAGGATCTCAAGATCGACCGTGATGAGGTGCTTGTCGTGAACTGTTTGTTTCGGTTTAGGAACCTACTTGATGAGACTGTAGTGGTGGACAGTCCAAGGAATGCTGTTCTGAACCTGATAAGGAAGATGAATCCGGATATTTTCATCCATGGGATCGTGAACGGTGCCTACAGCGCCCCCTTCTTTATAACACGGTTCCGGGAGGCTCTCTTCCACTTTTCCGCACTGTTTGATTTGCTTGAGACAAATGTACCCCGCGAACATCCAGAGAGGATACTGCTTGAGAGAGATATCTTTGGGCGGGAGGCTCTGAATGTCATAGCGTGTGAGGGCTCCGAGAGGGTCGAGAGGCCAGAAACTTATAAGCAGTGGCAGGTCCGGAATCTGAGGGCTGGATTCAGGCAACTCACACTGAACAAGGAGATCGTGAAGAAGGCAAGGGATAGGGTGAAATTGAGCTACCACAAGGATTTTGTTATCGATGAAGACAGCCAGTGGATGCTGCAGGGATGGAAAGGACGGATCATCTACGCGCTCTCCACTTGGAGACCTGCGTACGAGTCTTGA 2268 0.4731 MVMDPRLRGFSDSTNGLKFNDDSVSYQNLVNALKLEETFLDHNFMDHPLLPPDPNTNSLAPSSSVSPEEDSPEDCDFSDIVLKYISQMLMEEDMEEKSCMFQESSALQAAEKPFYEILGEKYPPPPNRPSLYVDQNAESPVDNFNGNYSNYTSSSSTSTSNNIVDTSWASDLVEYKSSQIQTIPIEYISQSSSQSSFSSSNSINNFVDGLVESPVSIVSIPDLFSESQPAWQFRRGVEEASKFLPNGNNLIRHLESNGLLPQEPKKEAGEVVVKVEKDEREHSPNGSRGKKNLHREDIDLEEGRSNKQSAVFAEETVRSEMFDMVLLCTGKGANAVSTLREALQTEASKNVQQNGQLKGSNGGKSRGKKQSGKREVVDLRTLLIHCAQAVAADDRRSANELLKQIRQHSSPFGDGTQRLAHCFADGLEARLAGTGSQIYTALITKRTSAADILKAYQLYLAACPFKKLSNFFSNQTIMNLAENATRLHIIDFGILYGFQWPCLFQRLSARPGGPPKLRITGIDFPQPGFRPSERVEETGRRLANYAESFNVPFEYNAIAVKWETIQIEDLKIDRDEVLVVNCLFRFRNLLDETVVVDSPRNAVLNLIRKMNPDIFIHGIVNGAYSAPFFITRFREALFHFSALFDLLETNVPREHPERILLERDIFGREALNVIACEGSERVERPETYKQWQVRNLRAGFRQLTLNKEIVKKARDRVKLSYHKDFVIDEDSQWMLQGWKGRIIYALSTWRPAYES* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01843 755 MobiDBLite consensus disorder prediction 275 304 - -
Eupl05g01843 755 MobiDBLite consensus disorder prediction 346 373 - -
Eupl05g01843 755 Pfam GRAS domain family 379 750 IPR005202 -
Eupl05g01843 755 MobiDBLite consensus disorder prediction 46 75 - -
Eupl05g01843 755 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 304 744 IPR005202 -
Eupl05g01843 755 MobiDBLite consensus disorder prediction 275 307 - -
Eupl05g01843 755 MobiDBLite consensus disorder prediction 346 366 - -
Eupl05g01843 755 ProSiteProfiles GRAS family profile. 370 750 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01843 Eupl-Chr5 43606245 43610174 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01843 81 752 GRAS Transcription Factor Family AT1G07530 53.035 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl05g01843 GRAS 6.7e-120 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01843 - - nnu:104597167 1075.08