Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01842 ATGTTCGATATGGTGTTGCTACATAACGAGAAGTGTGCAAGTGACGTGTCAAAACTCCGTGAAGCCGTGCAGACCGAAGCAAGCAAGAATGCGCAACAGAATGACCGTTTGAAAGGATCTAAGGGTAGAAAGTCTCGTGGTAAGAAACAGGGTGGTAAAAGGGAAGTCGTGGATTTGAGGACTCTTCTGGTTCTCTGTGCCCAAGCTGTTGCAATCGATGATCGTAGGAGCGCAAATGAACTACTGAAGCAGATCAGGCAGCACTCTTCACCTTTTGGGGATGGGACTCAGAGGTTAGCCCATTGCTTTGCAGATGGTCTCGAGGCACGCTTGGCTGGCACTGGGAGCCAGATTTACACATCTTTCATTACCAAGAGAATATCAGCTGCCGATTTCTTGAAAGCTTACCAACTCTTTTGCGCTGCTTGCCCATTCAAGAAGCTCGCAAATTTCTTCTCAAATCAGATGATTATGACTGTGGCTGACAATGCAAAAAGACTCCACATTATTGATTTTGGTATATATTATGGTTTCCAGTGGCCTAGCTTTATCCAACGGCTCTCAGCAAGTCCTGTTGGCCCCCCCAGGCTTCGAATTACTGGGATAGATCTTCCCCAACCTGGTTTCCGGCCTGCACAGAGAGTTGAGGAAACTGGCCGTCGCTTGGTAAATTACGCTAAGAGTTTCAATGTTCCTTTTGAGTACAATGGCATTGCTCAGAAATTGGAAACCATTCAAATCGAGGATCTCAAGATCGATCGTGATGAGGTGCTTGTTGTGAACTGTTCGTTTCAGTTTAAGAGCCTACTTGATGAGACCGTGGTGGTGGACAGTCCAAGGAATGCTGTTCTGAACCTTATAAGAAAGATGAATCCTGATATTTTCATCCACGGGATCGTGAGTGGGGCCTATGGTGCCCCCTTCTTTATAACACGGTTCCGGGAAGCTCTCTTCCACTATTCCGCATTGTTTGATCTGCTTGAGACAAATGTACCCCGCGAGGATCCAGAGAGACTACTGATTGAGAGAGAATTCATCAGGCGGGAGTCTTTGAATGTCATAGCGTGCGAGGGCTCGGAAAGGGTCGAGAGGCCAGAAACTTATAAGCAGTGGCAAGTCCGGAGTCTGAGGGCAGGATTCATGCAACTCCCACTAAACAAGGAGATCGTGAAGAAGGCAAGGGATTGGGTGAAATTGAACTACCACAAAGATTTTGTTGTCGACGAAGACAGTCAATGGATGTTGCAGGGATGGAAGGGACGGATCGTCTATGCGCACTCCGCTTGGAGACCTGTGTACGAGTCTTGA 1308 0.4748 MFDMVLLHNEKCASDVSKLREAVQTEASKNAQQNDRLKGSKGRKSRGKKQGGKREVVDLRTLLVLCAQAVAIDDRRSANELLKQIRQHSSPFGDGTQRLAHCFADGLEARLAGTGSQIYTSFITKRISAADFLKAYQLFCAACPFKKLANFFSNQMIMTVADNAKRLHIIDFGIYYGFQWPSFIQRLSASPVGPPRLRITGIDLPQPGFRPAQRVEETGRRLVNYAKSFNVPFEYNGIAQKLETIQIEDLKIDRDEVLVVNCSFQFKSLLDETVVVDSPRNAVLNLIRKMNPDIFIHGIVSGAYGAPFFITRFREALFHYSALFDLLETNVPREDPERLLIEREFIRRESLNVIACEGSERVERPETYKQWQVRSLRAGFMQLPLNKEIVKKARDWVKLNYHKDFVVDEDSQWMLQGWKGRIVYAHSAWRPVYES* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01842 435 Pfam GRAS domain family 59 430 IPR005202 -
Eupl05g01842 435 ProSiteProfiles GRAS family profile. 50 430 IPR005202 -
Eupl05g01842 435 MobiDBLite consensus disorder prediction 23 53 - -
Eupl05g01842 435 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 423 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01842 Eupl-Chr5 43584126 43585922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01842 50 431 GRAS Transcription Factor Family AT2G37650 64.398 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl05g01842 GRAS 2.4e-116 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01842 - - nnu:104597167 646.351