Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01841 ATGTTTATGGATCCACGTCGAAGAGGATTCTCTGATTCCATTAACGGGTTAATATTCAACAATGAGTCTGTTTCCGATCAGAACCTTGTTAACGCATTCAAATTCGAAGAGTCCTTTCTAGATCAAAACATCATGGATCTTCTTCTCATTCCACCTGATCCAAACCCTAATAGTCTTGCTCCATCTTCGAGCGTGACCCCTGAGGAAGATTCTCCTGAAGACTGCGATTTCTCCGATATAGTTCTGAAGTACATAAGTCAGATGCTTATGGAAGAAGACATGGAGGAGAAAAGCTGCATGTTCCAGGAGTCTTCAGCTCTTCAAGCCGCGGAAAAACCCTTTTATGAGATTCTTGGGGAGAAGTATCCCCCTTCACCAGATCCCCTCCATTTTTATGTAGATGACAATGCCGAAAGCCCAGTTGATAATATTAATGGCAATTTCAGTAACTATAACAGTAGTAGCAGCACTAGTAGTAGTAATAACACAGTAGATACCAGCTGGAATTATGATCTCGGTGAGTACAAGTCGTCTCAGATACAGACACTTCCTGTAGAATACACTTCCCAGTCCACTTCTCAGTCTTCTTTCAGCTCTCAAAACAGCATCAACAACTTTGTAGATGGGCTGGTGGAGTCTCCTGTAAGTATGGTTGGCGTTCCTGATTTATTTGGTGAGAGCCAACCTGCAAGGCAGTTCAGGAGAGGAGTTGAGGAAGCTAGTAAGTTCCTTCCAAATGGTAATAATCTTATTCTTCATCGGGAGAGCAATGGATTGTTAGCACTGGAGCCAAAGAAAGAGGCCTGCGAAGTTGTGGTCGAGGTGGAGAAGAAGGGTGAGAGTGAGCACTCAATTAACGGGTCGAGGGGAAAGAAGAATTTGCACCACGAGGATATAGATTTAGAAGGGAGAAGTAACAAGCAGTCGGCGGTTTTTGCTGAAGAAACTGTGCGTTCAAAGATGTTCGATATGGTGTTGCTCTGTAACGAGAAGTTTGCAAGTGAGGTGTCTACTCTCCGTGAAGCCGTGCAGACCGAAGCAAGCAAGAATGTGCAACAGAATGGCCATTTGAAAGGATCTAATGGTAGAAAGTCTCGTGGTAAGAAACAGGGTGGTAAAAGGGAAGTGGTGGATTTGAGGACTCTACTGGTTCACTGTGCCCAAGCTGTTGCAGTCGATGATCGTAGGAGTGCGAGTGAACTACTGAAGCAGATCAGGCAGCACTCTTCTCCTTTTGGGGATGGGACTCAGAGGTTAGCTCATTGCTTTGCAGATGGTCTTGAGGCACGCTTGGCTGGCACTGGGAGCGAGATTTACACAGCCTTCTTTACCAAGAGAAGATCAGCTGCCGATGTCTTGAAAGCTTACCGACTCTATCTCGCTGCATGCCCATTCAAAAAGCTCTCAAATTTCTTCTCGGCCCAGACTATTATGAATCTGGCTGAAAATGCAACAAGACTACACATTATTGATTTTGGTATAGACTACGGTTTCCAATGGCCCGGCCTTATCCAACGGCTCTCAGCAAGACCTGGTGGCCCCCCCAGGCTTCGAATTACTGGGATAGATCTTCCCCAACCTGGTTTCCGCCCAGCAGAGAAAGTTGATGAAACTGGGCGTCGCTTGGCAAATTATGCCGAGAGTTTCAATGTTCCTTTTGAGTACAATGGCATTGCTCAGAAATTGGAAACCATTCAAATCAAGGATCTCAAGATTGACCGTGATGAGGTGCTTGTTGTGAACTGTTTGTTTCAGTTTAGGAGCCTACTTGATGAGACCGTGGTGGTGGACAGTCCAAGGAATGCTGTTCTGAACTTGATAAGGAAGATGAATCCCGATATTTTCATCCACGGGATCCTGAATGGGGCCTATGGTGCCCCGTTCTTTGTAACACGGTTCCGGGAAGCTCTCTTCCACTACTCCGCACTGTTTGATATGCTTGAGACAAATGTACCCCGCGAGCATCCAGAGAGGGTACTGATTGAGAGAGAATTCTTCAGGCGGGATGCTTTGAATGTCATAGCGTGCGAGGGCTCGGAGAGGGTCGAGAGGCCAGAAACTTATAAGCAGTGGCAAGTCCGGAGTCTGAGGGCAGGATTCACGCAACTCCCACTGAACAAGGAGATCATGAAGAAGGCAAGGGATTGGGTGAAATTGACCTACCACAAGGATTTTGTTATCGACGAAGACAACCAATGGATGTTGCAGGGATGGAAGGGACGGATTATCTATGCGCACTCCACTTGGAGACCTGTGCACGAGTCTTGA 2268 0.4647 MFMDPRRRGFSDSINGLIFNNESVSDQNLVNAFKFEESFLDQNIMDLLLIPPDPNPNSLAPSSSVTPEEDSPEDCDFSDIVLKYISQMLMEEDMEEKSCMFQESSALQAAEKPFYEILGEKYPPSPDPLHFYVDDNAESPVDNINGNFSNYNSSSSTSSSNNTVDTSWNYDLGEYKSSQIQTLPVEYTSQSTSQSSFSSQNSINNFVDGLVESPVSMVGVPDLFGESQPARQFRRGVEEASKFLPNGNNLILHRESNGLLALEPKKEACEVVVEVEKKGESEHSINGSRGKKNLHHEDIDLEGRSNKQSAVFAEETVRSKMFDMVLLCNEKFASEVSTLREAVQTEASKNVQQNGHLKGSNGRKSRGKKQGGKREVVDLRTLLVHCAQAVAVDDRRSASELLKQIRQHSSPFGDGTQRLAHCFADGLEARLAGTGSEIYTAFFTKRRSAADVLKAYRLYLAACPFKKLSNFFSAQTIMNLAENATRLHIIDFGIDYGFQWPGLIQRLSARPGGPPRLRITGIDLPQPGFRPAEKVDETGRRLANYAESFNVPFEYNGIAQKLETIQIKDLKIDRDEVLVVNCLFQFRSLLDETVVVDSPRNAVLNLIRKMNPDIFIHGILNGAYGAPFFVTRFREALFHYSALFDMLETNVPREHPERVLIEREFFRRDALNVIACEGSERVERPETYKQWQVRSLRAGFTQLPLNKEIMKKARDWVKLTYHKDFVIDEDNQWMLQGWKGRIIYAHSTWRPVHES* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01841 755 MobiDBLite consensus disorder prediction 51 74 - -
Eupl05g01841 755 Pfam GRAS domain family 379 750 IPR005202 -
Eupl05g01841 755 MobiDBLite consensus disorder prediction 346 373 - -
Eupl05g01841 755 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 304 743 IPR005202 -
Eupl05g01841 755 MobiDBLite consensus disorder prediction 346 360 - -
Eupl05g01841 755 ProSiteProfiles GRAS family profile. 370 750 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01841 Eupl-Chr5 43574944 43577211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01841 81 751 GRAS Transcription Factor Family AT1G07530 52.273 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl05g01841 GRAS 2.1e-118 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01841 - - nnu:104597167 1001.89