Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01826 ATGGCGGCGAATGATCTGGAGATATTCAGTCATTTGCAGGAAGATGGATTTAAGGCTGGAGGGGGAGAGTTGAGATCGACAGCGATGGAAGCGGTGGGGTCTTCATCGTCGAAGAGCTGGGCTCAGCAGACTGAGGAGAGTTACCAATTGCAGCTGGCACTGGCGTTAAGGCTTTCGTCGGATGCTACTTGCGCTGATGATCCGAATTTCTTGGATCCGTTCCCCGATGAATCGGCGACCAGGTCTTCGTCTGCTTCACCCGAGGCTTTGTCTCATCGATTCTGGCAGGTGAATGGTTGCCTATCTTACTTTGATAAGGTTCCAGATGGGTTTTACCTGATCCATGGGATGAATCCATGTGTATGGACTGTATGCACTGATATCCAAGAGAATGGACGGGTCCCATCGCTTGAATCACTAAAGGCCATTGATCCCAGTGATAATTTGTCAATTGAAGTGGTTTTGATTGATCAACGCAGTGATCCGGGCATAAAGGAGCTACAGAATAGGGTAATTAGCCTTTCTTGTAGCTGCATTACCACAAAAGAAGTGGTTGATCAGCTTGCAAAGCTGGTTTGCAATTATATGGGGGGTGCAGCTTCTACTGGTGAAGATGGTTTGGTTTCCCGGTGGAAGGACTGCAGTGAGGTTCTAAAGGATTGCTTGGGCTCTGTCGTGCTTCCAATGGGAAGCCTATCCGTTGGTCTCTGCAGGCATCGTGCTCTGCTTTTCAAAGTTTTAGCGGACACAATTGATTTACCGTGCCGAATTGCCAAGGGCTGCAAATACTGTAGGAGAGATGATGCTTCTTCCTGTCTCGTGCGGTTTGGTCTTGACAGGGAATATTCAGTTGATTTGATTGGGAAGCCGGGATGTTTATGCGAGCCTAATTCCTTACTCAATGGTCCATCTTCCATCTCAATATCTTCACCTTTGCGTCTTCCAAAATTCAAACCAGTTGAAACAACTGAGAACTTCAGGTCATTGGCCAAACAGTATTTCCTGGACCGTCAATCACTTAATATTGTATTTGCTGATGCTCCTGCAGATATTGCTGTTGATCAAGAAGATGCAACAGATCCATTGTTTTCTGAGAAACACCTCCCACCAAATAGGCATAGAGAGGTTCAACCAATTTTACAGTTGCCTAATCCAAGGGTTGATACGGGCAGAGATCTAAGATTCATCGATGGATCAAGTAGTGAACTTTCTCTTGATGTGGAGGATTTGGCCATTCCATGGAGTGACCTTGTTTTAAAGGAGCAAATCGGAAAAGGTTCTTTTGGAGCTGTCCATCGTGCTGATTGGCATGGTTCGGATGTCGCTGTGAAGATCCTCATGGAGCAAGACTTTCCTGCTGAGCACTTCAATGAATTTTTGAGGGAGGTTGCGATAATGAAACGCCTACGGCATCCCAACATTGTTCTTTTCATGGGTGCTGTTACTCAGCCCCCAAACTTGTCCATTGTCACGGAATATTTATCAAGAGGCAGCTTATATGGGCTTTTGCATAAATCTGGTGCAAGGGAAATATTGGATGAGAGGCGGCGGTTAAATATGGCTTATGATGTGGCGAAGGGGATGAATTATCTTCATCGGCGCAATCCTCCTATTGTTCATCGAGATCTGAAGTCTCCAAATCTTTTGGTCGACAAAAAATATACAGTTAAGATCTGTGATTTTGGCCTTTCCCGCTTAAAGGAAAACACATTTCTCTCCTCTAAATCAGTAGCAGGGACCCCCGAGTGGATGGCACCAGAAGTTCTCCGTGATGAGTCATCAAATGAGAAGTCTGATGTTTACAGTTTTGGTGTGATTTTGTGGGAGCTTGTGACATTGGAACCACCTTGGAGTAATTTCAATAATGCACAGGTGATAGCTAATGTTGGTTTTAAGAATAAAAGGCTCGAGATTCCAAGCAATGTTGATCCTCAAGTGGCCATGTTAATTGAAGCTTGCTGGGCAAATGAGCCGTTGAAGCGTCCTTCCTTTTCCAGTGTCATGGAATCCTTGAAGCCGCTGATCAAGTCCCCGACCCCTCAACCAGTTCGTGCAGACATGCGGCAGCTAAGCTGGTGA 2079 0.4574 MAANDLEIFSHLQEDGFKAGGGELRSTAMEAVGSSSSKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPFPDESATRSSSASPEALSHRFWQVNGCLSYFDKVPDGFYLIHGMNPCVWTVCTDIQENGRVPSLESLKAIDPSDNLSIEVVLIDQRSDPGIKELQNRVISLSCSCITTKEVVDQLAKLVCNYMGGAASTGEDGLVSRWKDCSEVLKDCLGSVVLPMGSLSVGLCRHRALLFKVLADTIDLPCRIAKGCKYCRRDDASSCLVRFGLDREYSVDLIGKPGCLCEPNSLLNGPSSISISSPLRLPKFKPVETTENFRSLAKQYFLDRQSLNIVFADAPADIAVDQEDATDPLFSEKHLPPNRHREVQPILQLPNPRVDTGRDLRFIDGSSSELSLDVEDLAIPWSDLVLKEQIGKGSFGAVHRADWHGSDVAVKILMEQDFPAEHFNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYGLLHKSGAREILDERRRLNMAYDVAKGMNYLHRRNPPIVHRDLKSPNLLVDKKYTVKICDFGLSRLKENTFLSSKSVAGTPEWMAPEVLRDESSNEKSDVYSFGVILWELVTLEPPWSNFNNAQVIANVGFKNKRLEIPSNVDPQVAMLIEACWANEPLKRPSFSSVMESLKPLIKSPTPQPVRADMRQLSW* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01826 692 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 83 680 - -
Eupl05g01826 692 FunFam Serine/threonine-protein kinase isoform 1 407 495 - -
Eupl05g01826 692 CDD STKc_MAP3K-like 423 671 - -
Eupl05g01826 692 Gene3D Phosphorylase Kinase; domain 1 410 495 - -
Eupl05g01826 692 SUPERFAMILY Protein kinase-like (PK-like) 401 671 IPR011009 -
Eupl05g01826 692 Pfam Protein tyrosine and serine/threonine kinase 418 671 IPR001245 GO:0004672|GO:0006468
Eupl05g01826 692 FunFam Serine/threonine-protein kinase CTR1 496 681 - -
Eupl05g01826 692 Gene3D Transferase(Phosphotransferase) domain 1 496 685 - -
Eupl05g01826 692 Pfam Ethylene-responsive protein kinase Le-CTR1 88 294 - -
Eupl05g01826 692 ProSitePatterns Protein kinases ATP-binding region signature. 423 444 IPR017441 GO:0005524
Eupl05g01826 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Eupl05g01826 692 PRINTS Tyrosine kinase catalytic domain signature 579 589 IPR001245 GO:0004672|GO:0006468
Eupl05g01826 692 PRINTS Tyrosine kinase catalytic domain signature 642 664 IPR001245 GO:0004672|GO:0006468
Eupl05g01826 692 PRINTS Tyrosine kinase catalytic domain signature 491 504 IPR001245 GO:0004672|GO:0006468
Eupl05g01826 692 PRINTS Tyrosine kinase catalytic domain signature 532 550 IPR001245 GO:0004672|GO:0006468
Eupl05g01826 692 PRINTS Tyrosine kinase catalytic domain signature 598 620 IPR001245 GO:0004672|GO:0006468
Eupl05g01826 692 ProSiteProfiles Protein kinase domain profile. 417 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01826 692 SMART serkin_6 417 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01826 Eupl-Chr5 43352599 43368370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01826 40 687 MAP Kinase Kinase Kinase AT5G03730 70.136 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Eupl05g01826 PK_Tyr_Ser-Thr 2.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01826 K14510 - nnu:104587676 1062.37