Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01804 ATGTTCACAGCTGGTACAGATACAACCACAAGCACTTTGGAATGGGCGATGGCGGAGCTCCTCCACAACCCCAAGGCACTAGACAAAGTCCAGGCCGAGCTGAGAGAAGTCATTGGTTCAGATAGGAAGCTTGAAGAGCAAGACTTGAAACACCTCCCATACCTCAAAGCAGTCATCAAAGAGACTCTAAGGCTCCACCCACCTCTACCCTTTTTAGTCCCTCACATGGCCATTGACTCTTGCAAGATGCTTGGCTATTATATTCCCAAAGACATCCAAGTGCTCGTCAATGTGTGGGCAATTGGGAGAGACCCCAAAACATGGAAAGACCCTTTGGCCTTCAAGCCAGAGAGGTTCATGGAATCAAGCATTCCCGATTACAAAGGACATCATTTTGAGTTCATTCCATTCGGGTCGGGTCGACGGATGTGCCCTGCAGTTCCACTTGCTTCTCGCGTGCTCCCATTGGCTCTAGGATCTCTCTTGCACTCCTTTGATTGGGTCTTGGCAGATGGGGTAAAGCCGGAGGATTTGGACATGAGCGAACGTATGGGGATAACACTCAGGAAAGCTGTCCCATTGAAGGCTATACCTATACCTTACAAGGGATACCCAACTCAGGTCTCTACATAA 633 0.4913 MFTAGTDTTTSTLEWAMAELLHNPKALDKVQAELREVIGSDRKLEEQDLKHLPYLKAVIKETLRLHPPLPFLVPHMAIDSCKMLGYYIPKDIQVLVNVWAIGRDPKTWKDPLAFKPERFMESSIPDYKGHHFEFIPFGSGRRMCPAVPLASRVLPLALGSLLHSFDWVLADGVKPEDLDMSERMGITLRKAVPLKAIPIPYKGYPTQVST* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01804 210 Gene3D Cytochrome P450 1 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 PRINTS P450 superfamily signature 135 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 Coils Coil 27 47 - -
Eupl05g01804 210 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 137 146 IPR017972 GO:0005506|GO:0016705
Eupl05g01804 210 PRINTS E-class P450 group I signature 144 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 PRINTS E-class P450 group I signature 134 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 200 - -
Eupl05g01804 210 Pfam Cytochrome P450 1 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g01804 210 FunFam Predicted protein 2 196 - -
Eupl05g01804 210 SUPERFAMILY Cytochrome P450 1 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01804 Eupl-Chr5 43009401 43010033 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01804 1 203 Cytochrome P450 AT3G52970 68.932 8.14e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01804 - - pvy:116110178 365.155