Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01800 ATGGCCGCGCACAAACCACGCTCTTCCCGATCAAACTCCCTGCGAGAGTCTCACAATTCTCTATCCGAGTCGGAGAAGATGGAGGGCACCGGGAACTGGGACGCGCTTGAATGGACCAAGATCGAGCCTGTTTCGAGGTCTGTACCTCACGGCATGTCGGAGCTTCTGTTGGAAGCCGAAGAGGTTATAGTGGAGGGCCATGGCGTGGTTCTTGTAAATACTGACGAGGCCGGTACATTGTTGGTGACCAATTTCCGCCTTCTTTTTGTGAGTGAGGGAGCTAGGAACATTATTGCACTTGGCACAATACCATTGGCAACAATTGAGAAGTTCAGCAAACAAGTTATGAAGCTTCCCTCAGCCCCTCGTCAATTCGATAGGACTCCATCACGCCGACTTCTTCAAGTTATTGGTAAAGACATGAGAATTATTGTCTTTGGTTTTCGCCCTCGAATAAAGCAGAGACGTGCCGTGTTTGCTGCATTATGGAGATGTACAAGGCCAACTCAATTATGGGATCTTTATCCATTTACTTGCGGACCTTCGAAGTACAACAGCACCAATCCAAAGGTGCGGTTACTGAATGAGTATTTTCGGCTTCTCGGAAAAGGCTCCTATGATGCATCAAGTAGTACCTTCGAAGATGGGTCTTTTACTGTGTCTAATGAGTGGTGGAGAGTAAGTGGCATAAATTCCAACTATACAATGAGCCCAACCTATCCGTTCTCCTTTATTGTCCCTCAATGTATCAGTGATGAAGAAGTGCTACAGGCTTCTACTTTTCGTGCAAGGTGTCGGTTGCCTGTTATTTCATGGTGTCATCCAGGAACTGGAGCTGTTCTTGCACGTTCATCCCAACCTTTAGTTGGTCTCATGATGAACTCAAGGAGCAATGCTGATGAAAAGCTTGTTGCTGCACTTTGCAGTCATACTGTTGGTGCGAAGGGACCACGAAGGAAGCTTTATATTGCTGATGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGGGCAATGGGAGGTGGTTCAGAGTCATCTTCTAATTATTTCCAATCTGAGATCGTTTTTTTTGGGATAGACAATATTCATGCCATGAGGGATAGTCTTGCTCGACTTAGAGACTACCTAGATACTCATGGTGCAACTTCATCAGATGGACTATCATCATTCCTGAGAAATGGTGGATGGACCTGGGGTGGAGGCAACTTAAGCAGTATGTCTGCTTCAGTTTCAACCCTTGGAGATAGTGGGTGGTTAATACACATTCAAAGTATCCTGGCTGGTTCTGCTTGGATCGCTGCGCGTGTTGCTTTGGAATCATCCTCAGTTCTTGTTCATTGCAGTGATGGATGGGATAGAACAACTCAATTGGTCTCACTCGCTAGTTTGCTGCTTGATCCATACTATCGGACATTCAAGGGGTTTCAGGCACTTGTGGAAAAAGATTGGCTTGCATTTGGTCACCCATTTTCAGATCGCATGGGAATGCCAACAATATCTGGAAGTAGTAATGTGCCTTCAGAATTATCTCGGCAAGCGTCAGGTGGGAATATCCCGAAGTCACCAGTACACCACTCATCTGGATCATCACTAACATCACAAACTAGTACTTCATCTCTCGCACAGACATCAAGCAACTACTCTCCCATATTTTTGCAGTGGGTTGATTGCGTTTCACAGTTATTACGGATGTATCCTTTTGCTTTTGAGTTTTCCTCGGTTTTCTTAGTTGATTTCCTGGACTGCATGCTGTCCTGTCGCTTTGGAAACTTTTTATGCAACAGTGAAAAGGAGAGGCAGCAGTCTGGTGTTTCTGACACTTCTGGGTGCTTGTGGGTGTACTTCGCTGATTTGCGTGCTTCTGAAGGAAGCTCTCATGTGCACTATAACCTCTTTTATGATCCTTTGAAACATGATGGTCCACTATTACCTCCAGCGGCAGCATTAGCTCCGACGCTCTGGCCCCAATTCCATCTTCGGTGGGCCTGTCCCTCAGAAGCACAAGCTGGGGAGCTTGAAGCTCAATGTCGGATCATGGCTAAAAAATTTTCTGAAATGCAGAGGGAAAAGGAAGTGGCAGAAAAGAAGGCTAAAGATATCACAAGCAGCATGGAATCATTGAGCGCAGAACTACGGAGGGAGAAGCAGCTCAGCAGCTCGGTCAAGGACTTGGCCAATAGGGCCTGCAAGGAGAGTGCATCCATAAAGCGAGCAATACAGTCACTTGGATGCAAGGTTCACTTCTCGAGCAATGGGGACTGTGCCCTGGATCTCGAGAGTACCCCACCAGAAATACAACAGAAGGTTATGTATTCCCCTCCAAAGAGAAGCTCAGATGGTAATGTGCAGTGGGAGGAGAAACCGGATCTCTCTGTTTCTATTTCAGTTGTGGCAGATGATAACAATCCAATCAGTCAGGCTTGTGAAACCCTTTGCCCGTTACGCACTAGAGAGGGTGGTTGCAAGTGGCCAGATGCTGGTTGTGCACAACTTGGAAGCCAGTTTGTTGGACTGAAGGCAAATTTTGATGCGTTTGATCGGCTTTCAATTTATGATTGTTATTTTGGATCAGAGTAG 2574 0.4623 MAAHKPRSSRSNSLRESHNSLSESEKMEGTGNWDALEWTKIEPVSRSVPHGMSELLLEAEEVIVEGHGVVLVNTDEAGTLLVTNFRLLFVSEGARNIIALGTIPLATIEKFSKQVMKLPSAPRQFDRTPSRRLLQVIGKDMRIIVFGFRPRIKQRRAVFAALWRCTRPTQLWDLYPFTCGPSKYNSTNPKVRLLNEYFRLLGKGSYDASSSTFEDGSFTVSNEWWRVSGINSNYTMSPTYPFSFIVPQCISDEEVLQASTFRARCRLPVISWCHPGTGAVLARSSQPLVGLMMNSRSNADEKLVAALCSHTVGAKGPRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSLARLRDYLDTHGATSSDGLSSFLRNGGWTWGGGNLSSMSASVSTLGDSGWLIHIQSILAGSAWIAARVALESSSVLVHCSDGWDRTTQLVSLASLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRMGMPTISGSSNVPSELSRQASGGNIPKSPVHHSSGSSLTSQTSTSSLAQTSSNYSPIFLQWVDCVSQLLRMYPFAFEFSSVFLVDFLDCMLSCRFGNFLCNSEKERQQSGVSDTSGCLWVYFADLRASEGSSHVHYNLFYDPLKHDGPLLPPAAALAPTLWPQFHLRWACPSEAQAGELEAQCRIMAKKFSEMQREKEVAEKKAKDITSSMESLSAELRREKQLSSSVKDLANRACKESASIKRAIQSLGCKVHFSSNGDCALDLESTPPEIQQKVMYSPPKRSSDGNVQWEEKPDLSVSISVVADDNNPISQACETLCPLRTREGGCKWPDAGCAQLGSQFVGLKANFDAFDRLSIYDCYFGSE* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01800 857 ProSiteProfiles Myotubularin phosphatase domain. 202 657 IPR010569 -
Eupl05g01800 857 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 219 661 IPR029021 -
Eupl05g01800 857 ProSitePatterns Tyrosine specific protein phosphatases active site. 444 454 IPR016130 GO:0016311|GO:0016791
Eupl05g01800 857 CDD PTP-MTM-like 265 559 - -
Eupl05g01800 857 MobiDBLite consensus disorder prediction 1 29 - -
Eupl05g01800 857 Coils Coil 689 709 - -
Eupl05g01800 857 MobiDBLite consensus disorder prediction 501 534 - -
Eupl05g01800 857 Pfam Myotubularin-like phosphatase domain 193 599 IPR010569 -
Eupl05g01800 857 SUPERFAMILY PH domain-like 56 179 - -
Eupl05g01800 857 PANTHER MYOTUBULARIN-RELATED 22 767 IPR030564 -
Eupl05g01800 857 Gene3D - 67 166 IPR011993 -
Eupl05g01800 857 SMART gram2001c 47 115 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01800 Eupl-Chr5 42924334 42953802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01800 1 854 Protein tyrosine phosphatase (PTP) family AT3G10550 68.182 0.0 1186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01800 K18081 - nnu:104612520 1412.13