Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01799 ATGGCCGCTGTAGCCGAGGCTGTAAAATGCAACATCTGCAATGTGGTAAGGCTTAGGCGAATGGCATGGCTATGGCATAAGCTCGCTAGAGGCAGAGGGAGGACACCGCCTCGTGATGTCCCTCCAGGTCACTTAGCCGTCACTGTTGGGAATGCTGGTCGGAGGTTTGTTATAAGGGCCTCCTACTTGAACCACCCAGTCTTCAGGCAGCTCTTAGACCAAGCTTATGAAGAGTATGGTCACGATCACAATGGTCCTCTCGCTATCCCCTGCGACGAGCTTCTCTTCGAAGAGATTGTCCGGTCTCTCAGAGATAACCAGAATGTGAGTCATTGTCCTTGTCACATGGCCGAGAAAGAGCTTGGATCGTGGAGAGAGTCTAGACCTCTTCTTCATACAATTGCAAGAAAACCAACCTGGTAA 423 0.5083 MAAVAEAVKCNICNVVRLRRMAWLWHKLARGRGRTPPRDVPPGHLAVTVGNAGRRFVIRASYLNHPVFRQLLDQAYEEYGHDHNGPLAIPCDELLFEEIVRSLRDNQNVSHCPCHMAEKELGSWRESRPLLHTIARKPTW* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01799 140 Pfam Auxin responsive protein 34 103 IPR003676 GO:0009733
Eupl05g01799 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01799 Eupl-Chr5 42923364 42923786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01799 12 137 Calmodulin-binding Proteins AT4G34750 44.218 2.55e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01799 K14488 - nnu:104587436 185.652