Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01798 ATGGGGACGTCTGCTATGGCCTTCATCATCTTCATCTCCACCATTTCTCTCCTCTTCTCTTCTTCTCCTTCATCTGCTCAACTCGCAAACGACACCGACGCGCTTACTCGTTTCCGCTTGCAGACCGACGCTCACGGCAATCTTCTCACCAACTGGACCAGCGGAGACGCCTGCTCCGCCTCGTGGTTCGGCGTCAGATGTACCGATGGAAGAGTCACTGCTCTCTCACTCCCTTCCTTATACCTCCGTGGCCCAATCGACTCACTCGCTGAGTTAGACCAGCTCCGAGTCCTCGACCTTCACGCCAATCGCCTCAACGGAACCATCCTCCCTATCACCAATTGCTCTAATCTCAAACTCCTCTACCTCTCCGGCAATGATTTCTCTGGAGATATTCCAATAGAGATCGGAGCATTAAAGCGTCTGCTCAGATTAGATGTCTCCGATAACAATCTCCGAGGTCCGATCCCGGAAGCGATCTCGAAACTGACTCGTCTCATAACGGTTCGTCTCCAGAACAATGTTCTCTCCGGGCAGATTCCTGATCTCTCCACATCGCTGCCTGACCTCAGAGAGTTAAATATATCCAACAACGAGTTGTACGGGAAGCTGCCCGATGGGTTACAGAGGAAATTCGGAGATCGAAGCTTTGCAGGAAATGCAGGGCTTTGTGGATCGACTCCGTTTCCTGTTTGTTCCTTTACGGACTCTCCCCCATCAGCTGCAACGGCTCAATCGGTTGTTCCGTCGAATCCTAGCTCCTTGCCTACAACCCCGATAGCTAATCGGGGGAAAGATGGTGGGTCTCGTAAGGGACTTGGTACTGGTGCGATTGTCGCCATTGTTGTCGGAAATGCTGTGGTTTTACTGGTAATTACGTCTTTCATTGTTGCTTACTACTGTGGGAGATATCCTAAAGAGAGGAATTCGGATTCGAAAGGAAGGAGGAGGGGTGGAAGTAACAGTTCCAATGAAAAGAAGGTTTACGCGAGCAATGGAGGCGGAGATAGTGATGGGACAACGGCGACTGATCGGAGTAAGCTCGTGTTCTTCGACAGAAGGAAGCAGTTTGAGCTGGAAGACCTGCTTCGAGCTTCGGCGGAGATGTTGGGAAAAGGAAGCCTGGGAACGGTCTACAAGGCAGTGCTCGAGGACGGTTGCACGGTGGCTGTGAAAAGACTAAAGGATGCGAACCCTTGTGCGAGAAAGGAGTTCGAGCAGTACATGGACGTGATCGGGAAGCTCAAGTACCCCAACATTGTCCGTCTCAGGGCCTATTACTATGCCAAGGAGGAGAAGCTCCTTGTCTATGACTACCTCCCTAATGGAAGCCTGCACTCACTTCTCCATGGGAATCGTGGGCCGGGAAGAATTCCTTTAGATTGGACGACAAGGATCAGCTTGGTGCTTGGGGCTGCTCGTGGACTTGATCGGATTCATGAAGAATACAGCGCGTCGAAGGTACCACATGGGAACGTCAAATCGTCGAATGTTCTTCTTGACAAGAACGGTGTTGCTTGTATCTCTGATTTTGGGTTGGCGTTGCTTCTGAATCCAATTCATGCCACCGCAAGATTGGGTGGCTACCGGGCACCTGAGCAAGCTGAAACCAAGAGGCTTTCTCAGAAGGCGGACGTGTACAGTTTTGGAGTCCTGCTGTTGGAAGTGCTCACTGGAAGGGCTCCGACCCAGTATCCTTCCCCAGGTCGTCCACGCGACGAGGAAGAACAAGGGGTTGATCTTCCCAAGTGGGTAAGATCTGTGGTAAGAGACGAGTGGACGGCGGAGGTGTTTGACCCGGAGCTACTTAGGTACAAGAACATTGAGGAGGAGCTGGTGGCAATGCTCCATGTGGGACTAGCCTGTGTTGTGCAGCAGCCAGAGAAGAGGCCTACAATGTCGGAGGTGGCGAAAATGATCGAGGACATTCGGGTGGAGCAATCACCCCTAGGGGAGGACTTGGACGAATCACGCAATTCCCTGTCACCGTCCCTTGCCACCACCGAAGACGCACTGGCTAGCTATTGA 2028 0.5222 MGTSAMAFIIFISTISLLFSSSPSSAQLANDTDALTRFRLQTDAHGNLLTNWTSGDACSASWFGVRCTDGRVTALSLPSLYLRGPIDSLAELDQLRVLDLHANRLNGTILPITNCSNLKLLYLSGNDFSGDIPIEIGALKRLLRLDVSDNNLRGPIPEAISKLTRLITVRLQNNVLSGQIPDLSTSLPDLRELNISNNELYGKLPDGLQRKFGDRSFAGNAGLCGSTPFPVCSFTDSPPSAATAQSVVPSNPSSLPTTPIANRGKDGGSRKGLGTGAIVAIVVGNAVVLLVITSFIVAYYCGRYPKERNSDSKGRRRGGSNSSNEKKVYASNGGGDSDGTTATDRSKLVFFDRRKQFELEDLLRASAEMLGKGSLGTVYKAVLEDGCTVAVKRLKDANPCARKEFEQYMDVIGKLKYPNIVRLRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLDRIHEEYSASKVPHGNVKSSNVLLDKNGVACISDFGLALLLNPIHATARLGGYRAPEQAETKRLSQKADVYSFGVLLLEVLTGRAPTQYPSPGRPRDEEEQGVDLPKWVRSVVRDEWTAEVFDPELLRYKNIEEELVAMLHVGLACVVQQPEKRPTMSEVAKMIEDIRVEQSPLGEDLDESRNSLSPSLATTEDALASY* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01798 675 MobiDBLite consensus disorder prediction 240 260 - -
Eupl05g01798 675 FunFam Nuclear pore complex protein NUP107 28 182 - -
Eupl05g01798 675 SUPERFAMILY Protein kinase-like (PK-like) 368 640 IPR011009 -
Eupl05g01798 675 MobiDBLite consensus disorder prediction 323 341 - -
Eupl05g01798 675 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Eupl05g01798 675 Gene3D Transferase(Phosphotransferase) domain 1 440 661 - -
Eupl05g01798 675 MobiDBLite consensus disorder prediction 308 341 - -
Eupl05g01798 675 Gene3D Ribonuclease Inhibitor 30 139 IPR032675 -
Eupl05g01798 675 Gene3D Ribonuclease Inhibitor 140 216 IPR032675 -
Eupl05g01798 675 Pfam Protein kinase domain 368 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01798 675 ProSiteProfiles Protein kinase domain profile. 364 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01798 675 MobiDBLite consensus disorder prediction 308 322 - -
Eupl05g01798 675 Gene3D Phosphorylase Kinase; domain 1 337 439 - -
Eupl05g01798 675 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 440 652 - -
Eupl05g01798 675 MobiDBLite consensus disorder prediction 240 268 - -
Eupl05g01798 675 MobiDBLite consensus disorder prediction 648 675 - -
Eupl05g01798 675 MobiDBLite consensus disorder prediction 654 675 - -
Eupl05g01798 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 645 IPR046959 -
Eupl05g01798 675 SUPERFAMILY L domain-like 28 209 - -
Eupl05g01798 675 CDD STKc_IRAK 370 643 - -
Eupl05g01798 675 FunFam pollen receptor-like kinase 1 335 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01798 Eupl-Chr5 42910267 42912832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01798 30 669 Receptor kinase-like Gene Family AT2G36570 68.712 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl05g01798 Pkinase 2.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01798 - - vvi:100266483 1028.08