Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01797 ATGGCCTCCTGCGACGACGACTTCCCTCTTCTCGGAGACGAGAACCAAACCCCTCACCACCACCACTCCCACCCCTCTCATCACCACCAAACCTTCCCTCCTCATCGGTTCATAACCAAGGCAACGCCCATCCACTCTCACCCGCCACCACCTCCACCATCACAATCACACCCCCTAAACAGTCTTGCCGGTGGTGGAAGCCCTAAGAAGGTCGGCGGACCTACCGCTGGAGACGAAGAGGACGGTGATGACGACTACAGCGATGCTGGATTCTGTTCTCAGGCTGACACCAAGTGCCCTCCGGCCTTCCAGGGTGTGAATCCTTTTGCTGCCGAAGATGATGCGAACCCTTTCGCTGCTGATGACGAGTCTGACCCTAACAAATCTAGGGCTAATTCTCTCCCCGAGAAGCGCAAGGATCACGACGAGCTCAGCGATGGCGGCACCACTTACTGTTACAAGAAATCGAGGCCCGTTATTGGCCTCGCCGCCACTGGAACCTCCGGTGGGGGTGAGTACAGGGTTGATTGCAGGAAGGATCGAGAGGAGTGGAGTGATTCAGCTATCGGTTGCCTTCTCGATGCGTACACAGAGAAGTATGTTCAGCTTAATCGGGGGAATCTCCGGGGAAGGGATTGGGAGGAGGTGGCAACTATTGTGAGTGAGCGTTGCGATAAGCATAAGTCTGGCAAGAGTGTGGAGCAGTGCAAGAATAAGGTGGATAATTTGAAGAAGAGATATAAGGTGGAGCGGCATCGGATGACTAACAGTGGTTTGTCCATTAGCCATTGGCCTTGGTTTAAGAAGATAGAGCAGATTGTCAGCAATTCTGCAAAGGCCGTTTCTGATGAAGATAAGTCTGTTGGGGCATCTGCTAATATGCTTAGGCAGTCAAAGAGATATACAATTTCAACACCTAGCCCTGTTGGCTTGGCAAATAACGTGAAGTCTAAATCGTTGTCAAATCCTAGATGGCGGAGAGTGGTTTTCAAAATTAGTGGTGCTGCCTTAACTGGGACCGGCCCCCAAAATATTGACCCAAAGGTGACCTTGCTGATTGCTAGGGAAGTTGCAATTGCTTGTCGCCTTGGTGTAGAGGTGGCTATTGTTGTTGGAGGTCGTAATTTCTTTTGTGGAGACACGTGGATAGCTGCCACTGGCCTCGATAGATCTACTGCATACCAAATTGGGATGATGGCGACTGTGATGAACTCTATATTGCTTCAGTCAGCTTTAGAGAAGCAGGGCGTTGAGACGCGTGTACAAACAGCATTTCCAATGCAAGAAGTCGCCGAACCATACAGCAAGCGACGGGCCATCCGGCATCTTGAAAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTGCCGGCACAGGAAATCCACTCTTCACCACAGACACGGCAGCAGCTCTGAGAGCTTCAGAGCTTAATGCCGAGGCGGTCCTCAAAGGTACCAATGTTGATGGTGTATATGACTGCCATTCCAGAAACAACAACAATGTGGCATTTGAGCACATATCTTTTAGGGACTTGGTTTCCAGAGGTGTGACCTCCATGGACGTGATGGCAATAACATTCTGCGAGGAAAATGGAATTCCTGTTGTGGTCTTTAATCTACTTGAACCGGGCAACATTTCAAGAGCATTGTGTGGAAACCAAGTTGGTACCCTGATTGATCAAGCAGGAAGGATTAGCTGA 1698 0.5012 MASCDDDFPLLGDENQTPHHHHSHPSHHHQTFPPHRFITKATPIHSHPPPPPPSQSHPLNSLAGGGSPKKVGGPTAGDEEDGDDDYSDAGFCSQADTKCPPAFQGVNPFAAEDDANPFAADDESDPNKSRANSLPEKRKDHDELSDGGTTYCYKKSRPVIGLAATGTSGGGEYRVDCRKDREEWSDSAIGCLLDAYTEKYVQLNRGNLRGRDWEEVATIVSERCDKHKSGKSVEQCKNKVDNLKKRYKVERHRMTNSGLSISHWPWFKKIEQIVSNSAKAVSDEDKSVGASANMLRQSKRYTISTPSPVGLANNVKSKSLSNPRWRRVVFKISGAALTGTGPQNIDPKVTLLIAREVAIACRLGVEVAIVVGGRNFFCGDTWIAATGLDRSTAYQIGMMATVMNSILLQSALEKQGVETRVQTAFPMQEVAEPYSKRRAIRHLEKGRVVIFGGIGAGTGNPLFTTDTAAALRASELNAEAVLKGTNVDGVYDCHSRNNNNVAFEHISFRDLVSRGVTSMDVMAITFCEENGIPVVVFNLLEPGNISRALCGNQVGTLIDQAGRIS* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01797 565 Hamap Uridylate kinase [pyrH]. 323 559 IPR015963 GO:0005737|GO:0006221|GO:0033862
Eupl05g01797 565 Pfam Amino acid kinase family 327 538 IPR001048 -
Eupl05g01797 565 FunFam Uridylate kinase isoform A 317 564 - -
Eupl05g01797 565 CDD AAK_UMPK-PyrH-Ec 326 559 IPR015963 GO:0005737|GO:0006221|GO:0033862
Eupl05g01797 565 Gene3D - 315 564 IPR036393 -
Eupl05g01797 565 MobiDBLite consensus disorder prediction 121 147 - -
Eupl05g01797 565 MobiDBLite consensus disorder prediction 1 147 - -
Eupl05g01797 565 Pfam Myb/SANT-like DNA-binding domain 181 273 IPR044822 -
Eupl05g01797 565 FunFam Aspartate/glutamate/uridylate kinase family protein 184 249 - -
Eupl05g01797 565 Gene3D - 184 249 - -
Eupl05g01797 565 PANTHER URIDYLATE KINASE 178 564 - -
Eupl05g01797 565 Coils Coil 233 253 - -
Eupl05g01797 565 SUPERFAMILY Carbamate kinase-like 324 558 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01797 Eupl-Chr5 42898424 42908538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01797 161 279 Trihelix Transcription Factor Family AT3G14180 42.017 1.31e-22 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl05g01797 AA_kinase 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01797 - - nnu:104587412 879.396