Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01793 ATGCTGGGGCTAGAGATGCCTCTTCACCAACACCAACAACAGCAGCACCACCCCCACCATCAACACCCACACCAGCACCACCACCAGATGATAGCTTTTGCTGGTCACGACACCGACCCTCACACCCAATCTCTACAATCTGTAAAACAGAATGCCTACCCTTACACCACCAAAGGCAAGCAACAACAACAACAACAACCACAACAACAATTAGCATTGAGCGATGAAGACGAGCCCGGATTCGATGATGGTGGGGGAGATGGGAGGAAGCGAGTCTCGCAGTGGCAGAGAATGAAATGGACGGACAGTATGGTGAGGCTCCTTATCATGGTGGTGTTCTTCATTGGAGATGATGGTGGTACTGAAGGCAACGATCCTGTCGGTGTTAGCAAGAAGAAGTCAGGTGGGCTGTTGCAGAAGAAAGGGAAGTGGAAATCGGTATCGCGGGCGATGATGGAGAAGGGTTTCTTTGTGTCGCCACAGCAATGTGAAGACAAGTTCAATGACCTGAACAAGAGGTATAAGAGGGTTAACGATATCTTGGGTAAGGGCACAGCTTGTAGAGTGGTGGAGAACCAGAGCCTACTCGATACAATGGACCATCTCTCATCCAAGATGAAGGAGGAGGTGCGGAAGCTACTCAATTCCAAACACCTCTTCTTCAGGGAGATGTGTGCTTATCATAATAGTGGGGGTGTTGGTGGTGGTGGAGGAGGTGGAGTGGCTGGTGCCCATCAGTCATCGGATGTGGTGGTGGATTCATCTCATTCTCACCATCAACAGCAGCAGCGTTGCTTCCATTCATCAGAAAGTGCTGCTGTTGGGGCTAATTCAAGAAGCAGGGTGGAGAGAGAGGCATTAAAGATGGTAAAAGCAGGTAGTCGAAGAGAAGAAGAAGATGGGGATGGCGACGATGATGATGACGACGAAGATGATGATGAAGATGAAGATGATGAGGATGAAGAAGAAATTGAAGACGATGGTGCGGGAGGCGGGAAGGGTTATAATGAGCAAGGAGGACCTGAGGAGGAGGACGATGATGACAGAATGTTGCCAAAGAAGAGGCAACGAAGGGGTACGTTCTCGCCATTGTCTTCGATGTCACCATTGATGAAACAATTCAGCTGTGAATTAATGAGTGTGCTTCAAGATGGGACAAAAAGCCCGTGGGAGCAGAGGCAGTGGATGAGGAGCCGGTCGATGCAATTAGACGAGCAGAGGGTGAGCTACCAATGCCAGGCATTTGAGCTCGAGAAGCAACGATTAAAATGGGTTAAATTCAGTGGAAAGAAAGAGAGGGAGATGGAGAGGATGAAGCTCAACAACGAACGAATGAAGCTCGAAAATGAGAGGATGGTTCTTCTCCTTCGCCAGAAAGAGCTTGAATTGATCGATCTCCACCAACAACAGTCCAACAAGAGGCCTGACCCATCTTCCATAACCGGATGA 1449 0.4914 MLGLEMPLHQHQQQQHHPHHQHPHQHHHQMIAFAGHDTDPHTQSLQSVKQNAYPYTTKGKQQQQQQPQQQLALSDEDEPGFDDGGGDGRKRVSQWQRMKWTDSMVRLLIMVVFFIGDDGGTEGNDPVGVSKKKSGGLLQKKGKWKSVSRAMMEKGFFVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLDTMDHLSSKMKEEVRKLLNSKHLFFREMCAYHNSGGVGGGGGGGVAGAHQSSDVVVDSSHSHHQQQQRCFHSSESAAVGANSRSRVEREALKMVKAGSRREEEDGDGDDDDDDEDDDEDEDDEDEEEIEDDGAGGGKGYNEQGGPEEEDDDDRMLPKKRQRRGTFSPLSSMSPLMKQFSCELMSVLQDGTKSPWEQRQWMRSRSMQLDEQRVSYQCQAFELEKQRLKWVKFSGKKEREMERMKLNNERMKLENERMVLLLRQKELELIDLHQQQSNKRPDPSSITG* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01793 482 MobiDBLite consensus disorder prediction 13 27 - -
Eupl05g01793 482 PANTHER F16F4.11 PROTEIN-RELATED 1 465 - -
Eupl05g01793 482 MobiDBLite consensus disorder prediction 1 27 - -
Eupl05g01793 482 MobiDBLite consensus disorder prediction 238 368 - -
Eupl05g01793 482 MobiDBLite consensus disorder prediction 299 327 - -
Eupl05g01793 482 Pfam Myb/SANT-like DNA-binding domain 97 226 IPR044822 -
Eupl05g01793 482 Gene3D - 100 176 - -
Eupl05g01793 482 MobiDBLite consensus disorder prediction 248 276 - -
Eupl05g01793 482 Coils Coil 428 457 - -
Eupl05g01793 482 MobiDBLite consensus disorder prediction 281 298 - -
Eupl05g01793 482 MobiDBLite consensus disorder prediction 55 73 - -
Eupl05g01793 482 SUPERFAMILY ARM repeat 295 324 IPR016024 -
Eupl05g01793 482 MobiDBLite consensus disorder prediction 55 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01793 Eupl-Chr5 42852029 42854615 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl05g01793 Myb_DNA-bind_4 5.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01793 - - nnu:104612527 520.39