Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01784 ATGCACGTCCCTCTCCCTCTCTCTCTCTTCTCTCTCAACTCTCAACTAGGTCTATTTCCCGATCGATCCATAAATTATAGATCAAAGATGGCTTGGAACAGCAACTTGACCTTCCTTTATGACTACGACTTCGACCCATTTCCAGGAGTGGAGGTGAAGTGTCGTCCAGTAATGGAGGTGGCAATGGAAAGGCGGCCTTCGATTCCGGATAGAGGAAGCAGCAGCAGCAACAGCACCCAGGAGAGGAAGAGAAGGCTGACACGTGATCAGTTAGAGTTATTGGAGAGGAGCTTTCAGGAAGAGATAAAACTGGAACCTGAGAGGAAGATGAGGTTGGCTCGAGAGCTGAGACTACAGCCTCGACAAGTGGCTGTTTGGTTCCAAAATCGTCGAGTGAGGTGGAAGGCCAAGCAGCTCGAGCGAGTTTACGATGCACTTAAACAGGAGTTCAATGTTATCTATAGAGAGAAACAGATGCTTCAAGAGGAGGTTATGAAACTGAAGGCCAAGCTTGAGGACCGAGCAGGGGCAGAGCAAGGCATTGCAATTTATACCGAGGCCTTCGCCGAAGAGATCGTTGAGAGCACATCGGTCGTGACCGGCAGCTCTAACAAGTTTCAGCAGGGAACCAATTACCAGCAGATTGCCGAGTGCAACTATGGTTTCAATGTCGATGACTGTAGTCCAGCCTTGCCGCCGCCTTACTGGGCCGTATTGCCTGGTTACCCTTAA 732 0.4986 MHVPLPLSLFSLNSQLGLFPDRSINYRSKMAWNSNLTFLYDYDFDPFPGVEVKCRPVMEVAMERRPSIPDRGSSSSNSTQERKRRLTRDQLELLERSFQEEIKLEPERKMRLARELRLQPRQVAVWFQNRRVRWKAKQLERVYDALKQEFNVIYREKQMLQEEVMKLKAKLEDRAGAEQGIAIYTEAFAEEIVESTSVVTGSSNKFQQGTNYQQIAECNYGFNVDDCSPALPPPYWAVLPGYP* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01784 243 SMART HOX_1 80 141 IPR001356 GO:0003677
Eupl05g01784 243 CDD homeodomain 82 138 IPR001356 GO:0003677
Eupl05g01784 243 Pfam Homeodomain 82 135 IPR001356 GO:0003677
Eupl05g01784 243 Pfam Homeobox associated leucine zipper 137 171 IPR003106 GO:0006355|GO:0043565
Eupl05g01784 243 Coils Coil 129 163 - -
Eupl05g01784 243 ProSiteProfiles 'Homeobox' domain profile. 77 137 IPR001356 GO:0003677
Eupl05g01784 243 MobiDBLite consensus disorder prediction 63 86 - -
Eupl05g01784 243 ProSitePatterns 'Homeobox' domain signature. 112 135 IPR017970 GO:0000981|GO:0006355
Eupl05g01784 243 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 75 176 IPR045224 GO:0003700
Eupl05g01784 243 SUPERFAMILY Homeodomain-like 70 139 IPR009057 -
Eupl05g01784 243 Gene3D - 72 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01784 Eupl-Chr5 42631490 42632459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01784 33 167 Homeobox Transcription Factor Family AT5G03790 50.000 6.44e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl05g01784 Homeodomain 6.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01784 - - nnu:104612531 283.108