Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01782 ATGGAGAAGGATTTCGAGTCCAAGCTTCGTCTTCATAACCCTAATCACCCCGTCCAGAGATCCAAGAGCTTCGTTTTGAGGGCTCCTCAGGAGAACTTCACCATTAACGACTTCGATTTGGGCAAGATCTATGGCGTCGGTTCCTATTCCAAGGTCATGAGGGCAAAGAAGAAGGACACGGGAGATGTGTATGCTTTGAAGATTATGGACAAAAAATTCATCACCAAAGAAAATAAAATATCATATGTGAAGTTGGAACGTATTGTACTTGATCAATTGGATCATCCCGGCATAATCCGGCTATTTTTTACATTTCAAGACACCTATTCACTGTACATGGCCCTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAATTAGGAAAGGTCGTCTGTCAGAGGATGAAGCTCGCTTCTATGCAGCAGAAGTTGTTGATGCTCTTGAGTACATCCATGGCTTGGGATTGATTCATCGGGATATTAAGCCAGAGAACTTGCTACTCACTGCAGAAGGACATATTAAAATTGCTGATTTTGGTAGTGTAAAGCCTATGAAGGATAGCCAAATTACAGTCATTCCAACTATATCATCGGATGAAAAGGCTTGCACCTTTGTGGGAACAGCTGCATATGTCCCTCCGGAAGTCCTTAATTCTTCTCCGGCAACTTTTGGGAACGACCTTTGGGCACTGGGCTGCACCATATATCAGATGCTTTCAGGAACTTCTCCCTTCAAAGATGCAAGTGAATGGCTCATTTTTCAAAGAATTATAGCCAGGGATATCAGATTTCCAGACTATTTTTCATCAGAAGCTAGAGACCTTATTGATAAATTATTGGATACAGATTCCAGCAAAAGACCAGGTGTTGGACCTGATGGTTATGCTGCACTCAAGATGCATCCTTTTTTTAAGGGAGTTAACTGGAAAAATTTAAGAGCTCAATCCCCCCCGAAACTTGCTTTGGAGTCGAATGTAGTCAATATGGGCGAAGGTGATGGTGTTCAGGATTCTGGGTGGAACCTTTCACATTTTGGAGATGGTTCAGTTAGATACAATGATGGGAGTAGTGGTGCCACATCATCTTCTGAAGCATCTGGTCATACACCTAGGCTTGCTTCCATTGACTCGTTTGATTCAAGATGGCAACAATTCCTGGATCCTGGTGAGTCTATTGTTATGACCTCAATGGTGAAGAAAATACAGAAACTAAAGAATAAAAAGGTGCAACTTATCCTCACCGACAAACCCAAGCTGGTTTGCGTGGACCCTACAAAGCTGGTGGTCAAAGGGAACATAATCTGGTCTGACAACTGCAAAGACCTCAGCATCCAAGTCTCAAGTTCCTCACATTTCAAGATTTGCATGCCAAAGAAGATAATGTCTTTTGAGGATGCAAAACAAAGGGCATGGCAATGGAAGAAGGCGATCGAAGGACTTCCAAACCGTTGA 1455 0.4254 MEKDFESKLRLHNPNHPVQRSKSFVLRAPQENFTINDFDLGKIYGVGSYSKVMRAKKKDTGDVYALKIMDKKFITKENKISYVKLERIVLDQLDHPGIIRLFFTFQDTYSLYMALESCEGGELFDQIIRKGRLSEDEARFYAAEVVDALEYIHGLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMKDSQITVIPTISSDEKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTIYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSSEARDLIDKLLDTDSSKRPGVGPDGYAALKMHPFFKGVNWKNLRAQSPPKLALESNVVNMGEGDGVQDSGWNLSHFGDGSVRYNDGSSGATSSSEASGHTPRLASIDSFDSRWQQFLDPGESIVMTSMVKKIQKLKNKKVQLILTDKPKLVCVDPTKLVVKGNIIWSDNCKDLSIQVSSSSHFKICMPKKIMSFEDAKQRAWQWKKAIEGLPNR* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01782 484 Gene3D Transferase(Phosphotransferase) domain 1 122 317 - -
Eupl05g01782 484 FunFam 3-phosphoinositide-dependent protein kinase 2-like 122 320 - -
Eupl05g01782 484 ProSiteProfiles Protein kinase domain profile. 38 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01782 484 SMART serkin_6 38 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01782 484 SUPERFAMILY PH domain-like 299 481 - -
Eupl05g01782 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Eupl05g01782 484 FunFam 3-phosphoinositide-dependent protein kinase 1 354 484 - -
Eupl05g01782 484 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 320 - -
Eupl05g01782 484 FunFam 3-phosphoinositide-dependent protein kinase 2-like 36 121 - -
Eupl05g01782 484 Gene3D Phosphorylase Kinase; domain 1 36 121 - -
Eupl05g01782 484 Pfam PH domain 381 481 IPR033931 -
Eupl05g01782 484 SUPERFAMILY Protein kinase-like (PK-like) 15 321 IPR011009 -
Eupl05g01782 484 Pfam Protein kinase domain 42 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01782 484 CDD STKc_PDK1 36 305 IPR039046 GO:0004674
Eupl05g01782 484 Gene3D - 351 484 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01782 Eupl-Chr5 42617194 42625749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01782 1 484 AGC Kinase Gene Family AT3G10540 76.074 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Eupl05g01782 Pkinase 1.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01782 K06276 - nnu:104587314 831.247