LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl05g01777	ATGGCTACTATGCCATCATATCCCTACATCCTCAACTTTCCTCTTATTTCCTCTTCTTCACCTGAGACTCCATTTCTCTTCTTCTCTGAGCTTGCAGTTTCTCGCCTCATCCGATCATCATCGTCGTCACCATGGTCACCATATCACTACATATCTTTCCGGAGGAACAGCAATTCCATATTTCCTATCACTGCGAGGTTCTCTTCCAGACTCAGAAGCTTCGCGAAATCGACGGAAGAGAGATGGAAGGATGAAGAAATCCTCCGCAGCGAAGGCGAAGGCCGTGGCGATGGCGATGGCGATGAATGGAGGACCGACAAGGTGGAGCAAAAGAAGAATTCCGACGATAACGTCGTCTATCACGCTAGTTCGCGGAGGTTTTCCAGTTCTACGACCGATTCTCTCTCTCTCGGAATTAGAGAACCTGTTTACGAGGTGATAGAAGTGAAATCGGATGGGGTAATGTCTACGAGAAAGATTAATCGGCGGCAACTGTTGAAGTCAAGTGGTCTTCGTCCTCGAGATATTCGGAGCATTGATCCATCATTGTGGTTGACAAACTCAATGCCTTCTTTGCTGGTCCGAGAGCATGCTATTCTATTAAATCTTTTCTCATTACGTGCAATCGCCATGCAAGAACGTGTCCTTATATTTGATTATAGCCGTAAAGGAGGAAAAGCTTTTTTGGACCATTTGTTGCCTCGCTTAAACCCCAAAAACATGAATGGAGGGCCGTCGATGCCATTTGAGCTTGAGGTTGTTGAAGCTGCTTTGCTTTCACGAATACAACGTTTGGAGAAAAAATTAATGGATGTGGAACCTCGTGTTGCAGCACTACTTGAGGTTTTGCCCAACCGATTGACAGCTGACATATTGGAGCAACTTCGTCTAAGTAAACAAACACTGGTTGAATTGGGTTCACGGGCAGGGGCTCTCAAACAAATGCTGCTTGATCTTCTGGAAGATCCCCATGAAATACGCCGTATATGTATCATGGGAAGAAATTGCACTATTAGGAAAGGAGACAGTGACATGGAATGTTCCGCTCCCACAGAAAAGCATATTGCTGAAGAGGAGGAGGAAGAAATTGAGATGCTCCTGGAAAACTATCTTCAAAGGTGTGAATCTTGTCATGGACATGCAGAAAGACTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAACCTAAGCTCACGGAGGCTTGAGGTTAGCAGAGTGGAACTGCTTCTCCAGGTCGGGACATTTTGTATAGCAGTTGGTGCTCTGGTAGCGGGTATATTTGGGATGAACTTGAAGTCATATCTTGAAGAGCACGTGTTTGCGTTTTGGCTGACAACAGCTGGGATAATAGTCGGGGCTGTTGCAGCATTTTTTCTTATGTATTCTTACCTCAAGGCTAGGAGAATATTATGA	1422	0.4508	MATMPSYPYILNFPLISSSSPETPFLFFSELAVSRLIRSSSSSPWSPYHYISFRRNSNSIFPITARFSSRLRSFAKSTEERWKDEEILRSEGEGRGDGDGDEWRTDKVEQKKNSDDNVVYHASSRRFSSSTTDSLSLGIREPVYEVIEVKSDGVMSTRKINRRQLLKSSGLRPRDIRSIDPSLWLTNSMPSLLVREHAILLNLFSLRAIAMQERVLIFDYSRKGGKAFLDHLLPRLNPKNMNGGPSMPFELEVVEAALLSRIQRLEKKLMDVEPRVAALLEVLPNRLTADILEQLRLSKQTLVELGSRAGALKQMLLDLLEDPHEIRRICIMGRNCTIRKGDSDMECSAPTEKHIAEEEEEEIEMLLENYLQRCESCHGHAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCIAVGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIVGAVAAFFLMYSYLKARRIL*	474

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl05g01777	473	Coils	Coil	353	373	-	-
	Eupl05g01777	473	MobiDBLite	consensus disorder prediction	85	110	-	-
	Eupl05g01777	473	Pfam	CorA-like Mg2+ transporter protein	277	462	IPR002523	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Eupl05g01777	473	SUPERFAMILY	Magnesium transport protein CorA, transmembrane region	409	464	IPR045863	-
	Eupl05g01777	473	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	123	473	IPR039204	-
	Eupl05g01777	473	FunFam	Magnesium transporter MRS2-11, chloroplastic	139	220	-	-
	Eupl05g01777	473	CDD	Mrs2_Mfm1p-like	146	472	IPR039204	-
	Eupl05g01777	473	FunFam	Magnesium transporter MRS2-11, chloroplastic	222	404	-	-
	Eupl05g01777	473	Gene3D	-	139	220	-	-
	Eupl05g01777	473	Gene3D	Magnesium transport protein CorA, transmembrane region	221	404	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl05g01777	Eupl-Chr5	42529799	42542956	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl05g01777	137	473	MRS2 Gene Family	AT5G22830	83.086	0.0	559

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl05g01777	K16075		-	nnu:104590742	649.818

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