Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01771 ATGGAGGACAAGCAAAACGAGGATCGGAGCGAGAGCAGCGATTACACATCGGAAGACGAGGGAACGGAGGATTACAGGCGAGGAGGTTACCATGCCGTCCGAATCGGCGACACCTTCAAAGGCGGTTGCTACGTCGTGCAGAGCAAACTAGGTTGGGGCCATTTCTCCACCGTTTGGCTTGCTTGGGACACTCAGAACTCCAGATTTGTAGCTCTGAAAATCCAAAAGAGTGCTCAGCACTACACTGAGGCGGCGATGGATGAGATAACAATCCTTAAACAGATTGCAGAGGGGGACCCAGATGACAAGAAGTGCGTTGTCAAGCTCTTGGATCATTTCAAGCACTCAGGACCGAATGGGCAGCATGTCTGTATGGTTTTTGAGTACTTGGGTGATAATCTTCTTACGCTTATTAAGTATACCGATTACCGGGGAATGCCCCTCCACATGGTTAAGGAAATTTGTTTCCATATTCTAGTGGGTTTGGATTACTTGCATCGCCAGCTCTCTATTATACATACTGATATGAAGCCGGAGAATATCTTGCTCTTGTCCATGATTGACCTGTCTAAAGATCCCAGGAAATCGGGAGCTCCTCTCATTCTTCCAAGTAGAAAGGATAAATCTGTGTTTGAGTCTGCTGCCCCGAAAGACCCTAAGAGTTCGAATGGGGATTTGACAAAGAGCCAGAAGAAGAAGATTCGGAGAAAGGCCAAACGGGCAACTCAGGGTTGTGCGGGGAAGGAAGATTCTGAGGAAACTGAGCTGGATCCAAATTCAGCTGGTGTGGTAGATTCTACTGGTGATGCAAAATCAAATGCAGATGCCATGGAAAACCAGCCCTATAGTTCAGGTTGCAGAGACAACCCATCAAATGATGATGGGGTAAAGGATGCTCAGCAAGAAAATCAGGGTCATAGGAGAGGGAGCCGCTCCTCGAGGCAGAAGCTGTTGCAATCGATTGACCTAAAGTGCAAATTGGTTGACTTTGGCAATGCCTGTTGGACGTATAAACAGTTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCGGAGGTTCTTCTTGGATCTAAATATTCGACTTCAGCAGATCTATGGTCTTTTGCGTGCATTTGTTTTGAGCTGGCAACTGGTGATGTTCTCTTTGATCCTCACAGTGGTGACAACTTTGATAGGGATGAGGATCACTTGGCTTTGATGATGGAGCTTCTTGGGATGATGCCACGCAAGATTGCATTAGGTGGTCGGTATTCCCGGGACTTCTTCAACAGATATGGAGATCTGAGGCATATTCGGCGTTTGCGTTTCTGGCCCATGAATAAGGTACTCGTAGAGAAATATGAATTCAGCGAACAAGATGCTAATGACATGGCAGACTTCTTGATCCCCATATTGGATTTCGTTCCTGAGAAACGGCCAATGGCATCCCAATGCCTTCTCCATCCATGGATCAGTGCAGGCCCTCGGCTTCTCGAGCCTTCTGTGCCTGCCATTCAAACACAGAATGTGGATGATGGCAATTCTGAGAAGAAGAAAAAGGATAAGGATGAGAGGGAGGCAATGCAGGTGGGTGTGGGGAACATCGCCATTGATGGGCCTTCGAAACCCGCCAAAGATCCTCAACCTAGTAATAAATCCTCCAAGGCAACAACTGCTATTGGTTCTTCTAGGTAG 1677 0.4717 MEDKQNEDRSESSDYTSEDEGTEDYRRGGYHAVRIGDTFKGGCYVVQSKLGWGHFSTVWLAWDTQNSRFVALKIQKSAQHYTEAAMDEITILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGMPLHMVKEICFHILVGLDYLHRQLSIIHTDMKPENILLLSMIDLSKDPRKSGAPLILPSRKDKSVFESAAPKDPKSSNGDLTKSQKKKIRRKAKRATQGCAGKEDSEETELDPNSAGVVDSTGDAKSNADAMENQPYSSGCRDNPSNDDGVKDAQQENQGHRRGSRSSRQKLLQSIDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPMNKVLVEKYEFSEQDANDMADFLIPILDFVPEKRPMASQCLLHPWISAGPRLLEPSVPAIQTQNVDDGNSEKKKKDKDEREAMQVGVGNIAIDGPSKPAKDPQPSNKSSKATTAIGSSR* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01771 558 MobiDBLite consensus disorder prediction 291 309 - -
Eupl05g01771 558 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Eupl05g01771 558 FunFam CMGC/SRPK protein kinase 30 129 - -
Eupl05g01771 558 MobiDBLite consensus disorder prediction 540 558 - -
Eupl05g01771 558 SUPERFAMILY Protein kinase-like (PK-like) 40 498 IPR011009 -
Eupl05g01771 558 MobiDBLite consensus disorder prediction 272 290 - -
Eupl05g01771 558 CDD STKc_SRPK 33 485 - -
Eupl05g01771 558 MobiDBLite consensus disorder prediction 198 315 - -
Eupl05g01771 558 FunFam Serine/threonine-protein kinase SRPK-like protein 315 485 - -
Eupl05g01771 558 MobiDBLite consensus disorder prediction 498 558 - -
Eupl05g01771 558 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01771 558 MobiDBLite consensus disorder prediction 1 24 - -
Eupl05g01771 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Eupl05g01771 558 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 6 517 - -
Eupl05g01771 558 MobiDBLite consensus disorder prediction 506 522 - -
Eupl05g01771 558 Gene3D Transferase(Phosphotransferase) domain 1 127 486 - -
Eupl05g01771 558 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Eupl05g01771 558 Pfam Protein kinase domain 322 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01771 558 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01771 558 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01771 Eupl-Chr5 42462169 42482437 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01771 1 536 EF-hand Containing Proteins AT5G22840 69.131 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Eupl05g01771 Pkinase 1.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01771 K08832 - nnu:104587284 948.347