Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01769 ATGAAGAGGAATCCTCGCAAAGTAAAATGGACCAAGGCATACAGACGGCTGCATGGAAAGGATATGACACAGGATGAAACCTTTGAGTTTGAGAGGAAGCGAAACAGGCCTGAGAGATATGACAGGAACATTGCGGAGAACACCCTGAAGGCCATTAAAAAGATTGATAAAGTCAGAGTGGATAGGGAGGCCAGACACCATGTATTGAGGATGAAGGGGAAGAAAGCCAAGGAGCAGAGGGAGGCAGCCAAGGAGTTGGAACAGAGCATCCACATGGTCAAAGCTCCAGCCGCACTCCAACAAGAACCATCTCTTACTCTTCCGAAGATCAAAGTCAAGGTTTCCCAACAGCAAGCAGAAGAGAATCGTGCCATGGAAGAGTGA 384 0.4792 MKRNPRKVKWTKAYRRLHGKDMTQDETFEFERKRNRPERYDRNIAENTLKAIKKIDKVRVDREARHHVLRMKGKKAKEQREAAKELEQSIHMVKAPAALQQEPSLTLPKIKVKVSQQQAEENRAMEE* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01769 127 Coils Coil 69 89 - -
Eupl05g01769 127 PANTHER 60S RIBOSOMAL PROTEIN L24 1 126 IPR000988 -
Eupl05g01769 127 Pfam Ribosomal protein L24e 1 24 IPR000988 -
Eupl05g01769 127 Gene3D Ribosomal protein L24e 1 27 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01769 Eupl-Chr5 42446266 42446900 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01769 1 127 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 61.417 1.12e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01769 K02896 - vvi:100250021 231.876