Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01761 ATGGCATCTTCTTCGGACTCGTGGATGAGGGAATTCAATGAAGCATCAAAGCTTGCTGAGGATATTGGTGCCATGATTTCTGAAAAGGGATCTTTGCCCCCATCAGGACCAGAAACACAACGTCATTTATCTGCTATTCGGAGGAAAATTACAATATTAGGGACAAGACTTGATAGCTTGCAGTCCCTTCTGTCAAAGCTTCCTAGTAAGCAACCAATAACAGAGAAAGAGATGCATCGGCGCCAGGATATGCTTGCAAATTTGAGGTCGAAAGCCAACCAGATGGCCTCCACACTGAATATGTCCAACTTTGCTAACAGGGACATCTTGCTTGGGCAAGATATAAAACCAGCTGATGTTATGAGCAGATCAGCTGGGTTGGACAACCAAGGAATTGTTGGTTTTCAACGGCAAATTATGAGAGAACAAGATGAGGGCCTTGAGAAATTGGAGGAGACAGTATACAGTACAAAACATATTGCATTGGCAGTCAACGAGGAACTCGATCTTCACGCTAGGCTCATTGATACCTTGGACCAACATGTGGAATCAACGGACTCTCGACTACAGGTTACATTCTTGTTATCTATATACTTTTTGATTAGCATTCAACCCCATAATGTGTCATATAGGTACATTACCATTGGCCTTGGCAGTGGAGGCATATGCTGCACTTGTTTGGCAAGTCCATGCAAGTGGCAAGTACTCCTTGCAGACATTGGTGCACACAACGTGCAAAATCTCAGTAGTTGA 753 0.4369 MASSSDSWMREFNEASKLAEDIGAMISEKGSLPPSGPETQRHLSAIRRKITILGTRLDSLQSLLSKLPSKQPITEKEMHRRQDMLANLRSKANQMASTLNMSNFANRDILLGQDIKPADVMSRSAGLDNQGIVGFQRQIMREQDEGLEKLEETVYSTKHIALAVNEELDLHARLIDTLDQHVESTDSRLQVTFLLSIYFLISIQPHNVSYRYITIGLGSGGICCTCLASPCKWQVLLADIGAHNVQNLSS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01761 250 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 190 IPR000727 -
Eupl05g01761 250 PANTHER SYNTAXIN 14 190 IPR045242 -
Eupl05g01761 250 CDD SNARE_Qc 140 192 - -
Eupl05g01761 250 FunFam syntaxin-51 isoform X2 139 194 - -
Eupl05g01761 250 Gene3D - 139 193 - -
Eupl05g01761 250 SUPERFAMILY SNARE fusion complex 128 192 - -
Eupl05g01761 250 SMART tSNARE_6 132 198 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01761 Eupl-Chr5 42362072 42366508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01761 1 190 SNARE and Associated Proteins AT1G79590 71.579 7.22e-95 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01761 K08503 - nnu:104589757 317.775