Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01760 ATGAGGATAAGTAAACCAAATACAACACCACCCTTTCTTTATGGGTGTCTCTTCTTTCTCCTCATCTTTAGTCATCCCTCTTCTTCCCAGAAGACGTGCCCTAACTGTGGTTCCATGGAAGTTCCATACCCTCTAAGCACTAGCCCCAACTGTGGGGACCCTGATTACGCTCTTCGTTGCGATGCTCACACGCACAAGCTCTACTTTGACACTCTCAATGGAAGTTCTTATCTTGTCCTCAGCATACAAGCTTCCATGCAGCGCATGGTGGTGCTACCATCTCCTTGGGTGCCTGGGAAATGTGTCACACAAGACATGCCAGTGAGCGAGGGGCTCTTGTTGAACCAGTCACTTCCCTTCAATGTTACATCGTCCAACACTGTTTTCCTCTTCAATTGTTCACCTCGCCTCTTTGTCTCTCCTCTCAATTGCACCCCAACCAGCCTTTGCCACCGGTACTTGGAGCATTCGGGGCATGTTGATCCAAGTCGTGCACTCCAGTGTGCTAGCGGGGTCGACCCATGTTGCACGTTCATTGCAGGAGGCATGCCTTCAGCTTACAAGATACGGCTTCATGCTTCAGGTTGTCGAGCCTTCAGAAGCATCCTTCACCTGGATCCAGAGAAACCCACCAATGAATGGGAAGAAGGATTGGAGATTCAGTGGGCTCCTGTGCCGGAACCCGTCTGCAGAACCCAACTTGATTGCTCTGGAACTTCCACATGTTCGACTACAACTAGAGCCGGTTTCTTACGTTGCCTTTGCATTAGGGGCTACTACTGGAACCATGCTCTTGGAACTTGCTCGAGAAAGGCCAGCCACTCTACTACGAGCCTGAGTATGAAGGTCGCGATTGGTGTGTTCTCCTTTTTCGTACTTGCAATAGCTTTGACTGCCATCGCATTAAGAAAATCTGGCAAATTCTCCGCCCAGTCGAAGCTCGCAAAAACGAGAGAAGAGATGTTGAAAGCAAGCATTGGTGGGAAGTCTGCAAGGATGTTTGTTTTGAAAGAAGTGAAGAGGGCAACAGGTGGGTTTTCGAAGGACAGGATCTTGGGGATCGGTGGCTTCGGAGAGGTCTACAAAGGTGAGCTCCAAGATGGGACCATAGTAGCCGTTAAGTCTGCTAAGGTGGGGAACATCAAGAGCACCCAACAAGTGCTTAATGAAGTTGGGATACTCTCTCAAGTCAACCATAAGAACCTGGTCAGACTCTTGGGTTGTTGTGTGGAAGGGGAGCAACCGTTGATGATCTACGAGTACATACCCAATGGGACCCTCCATGACCATCTTCATGGTAAGGTTGCCACCTTTTTGAATTGGAAAACAAGGCTAAACATAGCCTTACAAACGGCTGAAGCCTTGGCCTATTTACACTCCTCAGCTTACACTCCCATCTATCATAGGGACGTTAAGTCAACCAACATTCTATTAGACAACGAGCTCAATGCCAAGGTGGCCGATTTCGGCCTCTCCAGATTGGCTCAACCGGGGTTGAGCCATGTGTCAACTTGTGCTCAGGGCACATTAGGCTATTTGGACCCCGAGTACTATCGGAACTACCAATTGACAGACAAGAGTGATGTCTACAGTTACGGGGTTGTGTTGCTTGAGCTCCTCACTTCACAGAAAGCTATTGAATTCTCACGAGACCAAGACGATGTGAACCTCGCCATGTTCGTGACTCGACGGGCTGATAGTGGTGCAGTCATGGAAGTTGTGGACCATCGGTTACTCGGCGACGAGCCTTTGATTGAGATAGTGACAAGCATCAAGCTCTTCGCCAAGCTCGCCCTTGCCTGTCTGCGGGAGAAGAAAGGGGAGAGGCCTAGCATGAAGGATGTAGTTGAAGAACTCCAGTGTATAATGGACATGGTAGATCAAGAAAAGGTTTCTAGTGAGTTAGGAGTTAGGGTTTTTTAA 1923 0.4893 MRISKPNTTPPFLYGCLFFLLIFSHPSSSQKTCPNCGSMEVPYPLSTSPNCGDPDYALRCDAHTHKLYFDTLNGSSYLVLSIQASMQRMVVLPSPWVPGKCVTQDMPVSEGLLLNQSLPFNVTSSNTVFLFNCSPRLFVSPLNCTPTSLCHRYLEHSGHVDPSRALQCASGVDPCCTFIAGGMPSAYKIRLHASGCRAFRSILHLDPEKPTNEWEEGLEIQWAPVPEPVCRTQLDCSGTSTCSTTTRAGFLRCLCIRGYYWNHALGTCSRKASHSTTSLSMKVAIGVFSFFVLAIALTAIALRKSGKFSAQSKLAKTREEMLKASIGGKSARMFVLKEVKRATGGFSKDRILGIGGFGEVYKGELQDGTIVAVKSAKVGNIKSTQQVLNEVGILSQVNHKNLVRLLGCCVEGEQPLMIYEYIPNGTLHDHLHGKVATFLNWKTRLNIALQTAEALAYLHSSAYTPIYHRDVKSTNILLDNELNAKVADFGLSRLAQPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIEFSRDQDDVNLAMFVTRRADSGAVMEVVDHRLLGDEPLIEIVTSIKLFAKLALACLREKKGERPSMKDVVEELQCIMDMVDQEKVSSELGVRVF* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01760 640 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Eupl05g01760 640 Gene3D Phosphorylase Kinase; domain 1 306 421 - -
Eupl05g01760 640 FunFam Wall-associated receptor kinase-like 20 308 421 - -
Eupl05g01760 640 ProSiteProfiles Protein kinase domain profile. 346 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01760 640 Pfam Wall-associated receptor kinase galacturonan-binding 33 91 IPR025287 GO:0030247
Eupl05g01760 640 SUPERFAMILY Protein kinase-like (PK-like) 325 620 IPR011009 -
Eupl05g01760 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Eupl05g01760 640 Gene3D Transferase(Phosphotransferase) domain 1 422 637 - -
Eupl05g01760 640 Pfam Protein kinase domain 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01760 640 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Eupl05g01760 640 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 626 IPR044652 GO:0004672
Eupl05g01760 640 FunFam Wall-associated receptor kinase-like 20 422 632 - -
Eupl05g01760 640 SMART serkin_6 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01760 640 CDD STKc_IRAK 352 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01760 Eupl-Chr5 42350465 42353116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01760 26 629 Receptor kinase-like Gene Family AT5G02070 47.950 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Eupl05g01760 Pkinase 8.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01760 - - vvi:132252525 1001.5