Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01748 ATGGAGTCAATGTTGGTCCCCCCATGGCTCGAACCCTTGCTATCGACCGATTTCTTCGCCGTCTGCCGGACACATGGAGATGCAGCAAGGAGCGAATGCAATATGTACTGTCTCGATTGTAATGGAGACGCGTTTTGCTTCTATTGCCGGTCATCAAGACATAAGGATCACAATGTAATTCAAATAAGGAGGTCATCATATCACGATGTGGTGAGGGTAGCTGAAATTCAAAAGGTGCTTGACATTAGTGGGGTACAGACTTATGTGATAAACAGTGCTAGAGTTATGTTCCTTAATGAGAGGCCTCAGCCCAAAACTGGTAAAGGGGTTTCTCATATTTGTGAAATTTGTGGAAGAAGTCTCTTAGACCCCTTTCGATTCTGCTCTTTGGGTTGTAAGCTTGTAGGAGTAAAGAGGAATGGTGATACGAGCTTCATGTTAGAGAAGAAGAATGAGATAATGGAAAGGGGAGAAGGGGTATCGAGGAGAGTGTCAAGAGAGGAAGAAGAATTGCGTGAAGGCACACAACACGACATATACCCGCCCACGCCTCCGCCTCCGTCTAATCCAAGGAGAAGAAAGGGCATTCCTCACAGGGCACCCTTTGGTTCCTAA 615 0.4618 MESMLVPPWLEPLLSTDFFAVCRTHGDAARSECNMYCLDCNGDAFCFYCRSSRHKDHNVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVMFLNERPQPKTGKGVSHICEICGRSLLDPFRFCSLGCKLVGVKRNGDTSFMLEKKNEIMERGEGVSRRVSREEEELREGTQHDIYPPTPPPPSNPRRRKGIPHRAPFGS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01748 204 Gene3D Classic Zinc Finger 20 65 - -
Eupl05g01748 204 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 202 - -
Eupl05g01748 204 SUPERFAMILY B-box zinc-binding domain 21 64 - -
Eupl05g01748 204 MobiDBLite consensus disorder prediction 156 176 - -
Eupl05g01748 204 Pfam PLATZ transcription factor 63 134 IPR006734 -
Eupl05g01748 204 MobiDBLite consensus disorder prediction 156 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01748 Eupl-Chr5 42134230 42135642 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Eupl05g01748 PLATZ 4.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01748 - - nnu:104586185 348.977