Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01737 ATGACCGATTTCCAACCGCTGCAACAGAAGCAGGAGAGCAATGATGTCCATGCCGAGTTTCAGCGGGGATTGGAGGAGTTGATGCGCGGTCATTTGGATGATTGTATGTCATTGGCTTCTTGTAGCTCTACTCGTGATCAAGAGGAGGAAGATGAGGAGGCCGATCAGCTGGTGCGCCGGAGGCGGCGCTCAGATCTTGAAGGAGATGACCTGGCAGAGTCTTCTGCTGCGCGTAGGCGCCACTCTCGGATATTGAGTAGGTGGGCTGCACGGCAGGCCCAGGAGATGATTACAACACTTGAGAGGCGGAATCGTGAGTCTGAACTTATGGCTCTTGCGGGTTTGCACACTGTCTCCATGCTTGATTCTTCTTTCCTGAGGGAGTCACAGTCTCCAACTTCAAGACGGCAGGGTGCCGTTGAGAGGCCTAGCACCCAGCCATCCTCTCTCCTGCAAATGTGGCGGGAGCTGGAGGATGAGCACGTACTCAACCGTGCCAGAGAAAGAGTGAGGGAAAGGTTGAGGCAACAGAGGAGTGTTGAGTCGAATGCCAACCTCTCGAGCACGAACATGTCGGAAAGCAGGGGGAGCGAACATCAGGCTAGTTCGGAGGATGCTAGTGAGAGCGAGATTGAGTATGGGACATGGTCCCAAGGTCAAATGGAGTCACAGAATGAACGTGGGGACCACCACCACATTTCTAGCCGGGAGCAGTCTCCTGACCTTGGAGAAGTAGAAAGGGAGAGGGTGAGGCATATTGTTCGGGGATGGATGGATAGTGGCATAAGTGACCACACGTCTAATGTTTCCCAGAGGAACAGCCCAAGGGCAGAATGGCTTGGTGAAACTGAACGTGAGAGGGTGAGACTTGTGAGGGAGTGGGTCCAAATGACAAGTCAGCAGAGAGGTACACGTGGCAGCAGAAGGGAAGAACAAGCTGCAGGACTCAGTACTCCAATCGACCGCGTTCAGGATGGGGCGGTTGTTGACCATGATGAAGGCCAACCTGAACATATCCGGAGGGACATGCTAAGATTACGCGGCAGACAGGCTCTACTCGATTTGCTTGTGAGAATTGAGAGAGAGAGGCAGAGGGAATTGCAGGGATTGTTGGAGCATCGGGCCGTTTCAGATTTTGCTCACCGCAACCGCATTCAGTCATTACTCAGAGGCAGATTTCTACGAAATGAAAGATCTACCGAGGATGAGAGACCAACTTCTATGGCGGCTAGCGAATTAGGCCAGTTAAGACAACGACATACTGTTTCTGGTTTGAGGGAGGGATTCCGATCCAGATTGGAAAATATTGTTCGTGGTCAAGTAAGCAACCATTCTGAGACCTCATCTAACAATAACATCAATGGTTCTAGAAATGAACCAACTCAAACAAGCACTTCACAGGAGGTTCCAATTGAAAACCATGAACAATCTCAACCTAGTGGCCAAGAAAGTGATGTTCATCAGTTATTAGAGCATACGGGTGACTTGGAAAGCAACACAGCTGTTGAAAGTGCAAGTTGGCAAGAACCTACTAGTCAAGGAGGGGATTGGCAAGAACAACTTACAGAAGATGAGAGAAGAGACTGGCAACAGTCTACTGAAGTAGAGTTTAATGAATGGCGAGATGGTAATGAAGAGGAAATGGATGGAAACTGGCAGGAGAACACAGCTATAGATTGGCCCCAAGAAACTCCAGGAAGTGACGGTGGAGAAGGTAGTCATCTTCAAGAAACGCATGAGGAGTGGCATGAGGATGGCTCTCGGGATGCCGTTGATAACTGGCCTGACAGGCCTTCTGATCCTCCAAGAACTCGGCATGCTGTTCCCATTAGAAGGGTCAATAGATTCCATCCACCCGATGATGATAATGTGTATAGTATGGAACTCAGGGAGCTCCTTAGCAGGAGAAGTGTCTCTAATCTTCTTCGCAGTGGGTTTCGTGAGAGTCTAGACCAATTGATACAGTCATATGTGGAAAGGCAAGGTCGTGCTCCCATTGACTGGGATCTGCATAGAACCTTGCCTACGCCTGCTTCACCAGAGCAAGATCAGGGGCAGAGAGACGATCAGAATGAGGATCAGCCAGATACTGCTGCTAGACCTCCGATTGTGCTACCTTCTCCGCCCGTGCCCCCACCACAACCGCTGTGGCACCAGGAGCTGCATCATGCTAATTGGCCTCGGCACAGCATGCATCGGTCAGAAATTGAGTGGGAGATCATTAATGATTTGAGGGCTGACATGGCTAGACTTCAGCAAGGGATGAGCCACATGCAGAGGATGTTGGAGGCTTGCATGGATATGCAGCTGGAGTTGCAGCGGTCAGTTAGACAAGAAGTCTCTGCAGCTTTAAATCGCTCCGCTGGTGGACCAGGGGACGGTGTGGAGTCATCGGAGGATGGATCTAAATGGGGTCATGTGAGGAAGGGGACTTGCTGCGTGTGTTGTGATAGTCATATTGATTCTCTACTGTACAGATGTGGGCACATGTGCACTTGTTCAAAGTGTGCAAATGAGTTGGTTCGAGGTGGAGGAAAGTGTCCTTTGTGTCGTGCACCGATTGTCGAGGTCATCCGAGCTTATTCCATACTGTAA 2595 0.5048 MTDFQPLQQKQESNDVHAEFQRGLEELMRGHLDDCMSLASCSSTRDQEEEDEEADQLVRRRRRSDLEGDDLAESSAARRRHSRILSRWAARQAQEMITTLERRNRESELMALAGLHTVSMLDSSFLRESQSPTSRRQGAVERPSTQPSSLLQMWRELEDEHVLNRARERVRERLRQQRSVESNANLSSTNMSESRGSEHQASSEDASESEIEYGTWSQGQMESQNERGDHHHISSREQSPDLGEVERERVRHIVRGWMDSGISDHTSNVSQRNSPRAEWLGETERERVRLVREWVQMTSQQRGTRGSRREEQAAGLSTPIDRVQDGAVVDHDEGQPEHIRRDMLRLRGRQALLDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERSTEDERPTSMAASELGQLRQRHTVSGLREGFRSRLENIVRGQVSNHSETSSNNNINGSRNEPTQTSTSQEVPIENHEQSQPSGQESDVHQLLEHTGDLESNTAVESASWQEPTSQGGDWQEQLTEDERRDWQQSTEVEFNEWRDGNEEEMDGNWQENTAIDWPQETPGSDGGEGSHLQETHEEWHEDGSRDAVDNWPDRPSDPPRTRHAVPIRRVNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPIDWDLHRTLPTPASPEQDQGQRDDQNEDQPDTAARPPIVLPSPPVPPPQPLWHQELHHANWPRHSMHRSEIEWEIINDLRADMARLQQGMSHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGGPGDGVESSEDGSKWGHVRKGTCCVCCDSHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVIRAYSIL* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01737 864 Pfam Zinc finger, C3HC4 type (RING finger) 809 856 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 396 425 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 54 78 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 498 518 - -
Eupl05g01737 864 Coils Coil 741 761 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 40 78 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 173 245 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 573 622 - -
Eupl05g01737 864 ProSiteProfiles Zinc finger RING-type profile. 812 851 IPR001841 -
Eupl05g01737 864 CDD mRING-HC-C3HC5_NEU1 809 861 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 498 622 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 437 486 - -
Eupl05g01737 864 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 796 862 IPR013083 -
Eupl05g01737 864 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 110 864 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 224 245 - -
Eupl05g01737 864 SUPERFAMILY RING/U-box 811 857 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 519 548 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 179 197 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 124 151 - -
Eupl05g01737 864 Coils Coil 90 110 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 668 714 - -
Eupl05g01737 864 MobiDBLite consensus disorder prediction 207 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01737 Eupl-Chr5 42010130 42021928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01737 776 858 C3H Transcription Factor Family AT3G06140 32.530 9.91e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01737 - - nnu:104586194 1358.2