Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01708 ATGTCATCGTTTGAGCAGAGGGTTCAATCCTGTGATAAAAGATACCAGTATCTTCTGTTTGCAGCTGAGCCGTACGAAATCATTGCTTTCAAGGTTCCTAGCACAGAGATTGACAAATCCACACCCAAGTTCTTCTCGCATTGGGATCCTGACTCGAAAATGTTCACGGTTTGTGTCATTTCTTCATGTTTTATTATGATCCCACCTCGCTACATGTTTTTTAGGCTTGTGAGCTTTGTCTGTCTGTTAATATGTGGGACGAATGTACAGTTGCAGTTATACTTCAAAATCAAACCACCAGAGACGAATAAACCTCAACCTGTGCCTGTTGCCAACGGCACAGCGGCTCCTGGTGTTCCTCCGAGGCCCTTGCCTCCACCACCTCAAGCACCGCCACCACCACCACAAGGGATTCCACCTGGTGCTCAAATGGCTAATCCTCCCAGAGGTCCACCACCTACGATGCCTGGCTCTGCACCACCACCCCCGCCTCCACCAATGGCAAATGGTCCTCGACCAATGCCTCCTGGTGGAAGCTTGCCTGTCCCACCACCACCCCCAGTTGGTAGTGGTACAATGGCAAACTTCACTCCAGGCACTCAGATTGGTCGACCACCATCAATGATGCCTCCACAAGGTTTCCCGGGGCAACAGATTCAGGGTCAAGGGGTTCGTCCTGCCCCACCTCCTAACATGGGACAACAGCACCCAAGGCCACCCATGTCTTAG 729 0.5144 MSSFEQRVQSCDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTVCVISSCFIMIPPRYMFFRLVSFVCLLICGTNVQLQLYFKIKPPETNKPQPVPVANGTAAPGVPPRPLPPPPQAPPPPPQGIPPGAQMANPPRGPPPTMPGSAPPPPPPPMANGPRPMPPGGSLPVPPPPPVGSGTMANFTPGTQIGRPPSMMPPQGFPGQQIQGQGVRPAPPPNMGQQHPRPPMS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01708 242 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 1 55 IPR031781 -
Eupl05g01708 242 Gene3D - 1 62 - -
Eupl05g01708 242 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 58 - -
Eupl05g01708 242 MobiDBLite consensus disorder prediction 102 242 - -
Eupl05g01708 242 MobiDBLite consensus disorder prediction 114 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01708 Eupl-Chr5 41560830 41570899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01708 1 113 C2H2 Transcription Factor Family AT2G32600 56.637 7.06e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01708 K12826 - nnu:104604567 207.223