Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01707 ATGGGAGGTGAAGCAGCGACAGCACTCGCTCCGGGTTTCCGATTCCACCCAACCGACGAAGAACTCGTTATTTACTATCTCAAGCGGAAGGTCTGCGGAAGGACCTTTCGAGTCGATGCGATCTCTGAAATCGATATCTACAAATCAGAGCCGTGGGATCTTCCAGCTCAATCGCGATTGAAGAGTAGAGACCTAGAGTGGTATTTCTTTAGCGTCCTAGATAAGAAGTATGGTAACGGGTCGAGGACGAACCGAGCTACGGACCAAGGGTACTGGAAGACGACCGGGAAGGACCGGCCGGTCCGACGTGGCAATCGGACGGTCGGGATGAAGAAGACCCTTGTGTTTCACGTCGGACGGGCTCCACGTGGTGAGCGAACCAATTGGGTTATGCACGAGTACAGGCTCGTCGATGAAGAATTAGGGCAAGCGGGTATTGCGCAGGATGCATTTGTGCTGTGTAGGGTTTTTGAGAAGAGTGGTACGGGGCCCAAGAATGGGGAGCAGTACGGAGCGCCGTTTATTGAGGAAGATTGGGAGGATATTGGGTTTGCTGATGTTGGTGTTGTTGGTGATGAAGGATACGTTCAGGAGCAGAATGAGGATGAACAGATTTTTCCCTTGGCAATTCCACCTGGCAATTTTGCTCTTCCGGTGGGCTTTGATGGCGGGGATGACTGCAACCATTTAGAGGAGGACCCTAGGGGCTTTCTTGAAGATGATCGAAAGTTTTTTATTGGCACAACGGATAAACTTGATGACTTGCCAGAACTGCCTGATGAGCAAAAGTTCATTGAGTTACCAGAACAGTATCAGATGGACCAAACACCAGTCAAAGATGAACTTTTTGAAATAGATGATCTTTTGAATCCTGTGGATGCTGATTACCCAGTTGATGGGGAGCTGACATACTTTGATGCTCCTCCTCATGATCCACCAGTTGGCAACGGATCATTCCTGGAAATTGATGATCTTGGAGACTCTGTAGATGCAGATCTATCAGGGTTTGAAATGCTTGATGAATACCTTACGTTCTTTGACACCGATGATATGTTTGCCACCGATGATAACTTTAACTATGTGGCTTCAGATTCTTCTAATATTTTGAACCAATCAGCTTGCACTGAGGAGCAGGTGAATAGTGGAATAGGACAAACGTACCTGGCATCCCCGGAGCCTTCAAAAACACATGGTGACGAAGGTGCATCCTCTTCAAAGCAAAAACCTGAGATCACAGAGATTGCACAAGATGTCCAATACAATGAGGGTTGGGATAATAACATTGCCAAACAGGTCAGTCGCATGTTGGGGTCCATCACTGCTCCTCCTGCATTTGCTGCAGAGTTCCCTACAAAGGAGGCAGCTTTGGGACAGAACTCAAGAACGCAGTCTTCCAGTTCAATCCATGTTACAGCTGGGATGATCCGAATAAGCAGCACGACTGTAAGTGGCAGTGGAAAGAACTGGTCATTGGATAAGAGTGGAGAGGTGGATTTCCTCCTTCCCTATGGCATGACAAGGGGCGATGTGATGACTGTTGATCATCTGATTGGCAACTCCGTTGAACCGATGGCTAACATACTGTCAGGCAAGGCAGGGACGATGATGATACGGAGTGGGTTCTACTTTATCTTCCTCTGGGTCCTGATTCTTTCAGTGAGCTACAAAATTGGAAGCTATATTTACACCAGTTGA 1695 0.4773 MGGEAATALAPGFRFHPTDEELVIYYLKRKVCGRTFRVDAISEIDIYKSEPWDLPAQSRLKSRDLEWYFFSVLDKKYGNGSRTNRATDQGYWKTTGKDRPVRRGNRTVGMKKTLVFHVGRAPRGERTNWVMHEYRLVDEELGQAGIAQDAFVLCRVFEKSGTGPKNGEQYGAPFIEEDWEDIGFADVGVVGDEGYVQEQNEDEQIFPLAIPPGNFALPVGFDGGDDCNHLEEDPRGFLEDDRKFFIGTTDKLDDLPELPDEQKFIELPEQYQMDQTPVKDELFEIDDLLNPVDADYPVDGELTYFDAPPHDPPVGNGSFLEIDDLGDSVDADLSGFEMLDEYLTFFDTDDMFATDDNFNYVASDSSNILNQSACTEEQVNSGIGQTYLASPEPSKTHGDEGASSSKQKPEITEIAQDVQYNEGWDNNIAKQVSRMLGSITAPPAFAAEFPTKEAALGQNSRTQSSSSIHVTAGMIRISSTTVSGSGKNWSLDKSGEVDFLLPYGMTRGDVMTVDHLIGNSVEPMANILSGKAGTMMIRSGFYFIFLWVLILSVSYKIGSYIYTS* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01707 564 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Eupl05g01707 564 FunFam Nac domain-containing protein 86 18 162 - -
Eupl05g01707 564 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 205 - -
Eupl05g01707 564 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Eupl05g01707 564 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Eupl05g01707 564 MobiDBLite consensus disorder prediction 385 409 - -
Eupl05g01707 564 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01707 Eupl-Chr5 41550240 41558204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01707 1 561 NAC Transcription Factor Family AT5G04410 41.541 7.22e-136 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl05g01707 NAM 2.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01707 - - tss:122651758 639.032