Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01704 ATGGCGGTCCCGGGTAGGCGCAATGGGATGGAGGACGACGACGACGAAGAGCCCGAGGGTCTGTTCGAAGAAGAAGGTCTAGTGGTCGACATCTACGCCGACACACCGCCACACCTTCGCGCCCTCGCTGAAGCTGCCCAGCTCGGCAACGTCGACGCCCTTCGCCACGCTCTCGATAATTTGACTGGAAGTATTGATGAACCAGTGGAAGATGGGGACACCGCCCTCCATTTGACCTGTCTCTATGGCTATCTGCCTTGTGTTCAGCTACTTTTGGAAAGGGGAGCTAGCTTGGAGGCCAAGGATGAGGATGGGGCAATTCCTCTTCATGATGCTTGTGCAGGGGGATTTACTGAAATAGTACAACTTCTAATCAACACTGCTGACTCAAACTGTTTGAAGCGGATGCTAGACACACTCGATGCAGAAGGCGATACTCCCCTTCATCACGCTGCGAGAGGTGAACATGTGGATGTTGTGCGGATATTACTGGCAGCCGGGGCTTCTTCTACAAAGACAAACACATATGGAAAGACCCCTGGTGAGCTGTCTGATCCAGAGACAGAAGTGAGAAGACTATTAGAAGCTGCTGAGGCATGTTAG 603 0.5274 MAVPGRRNGMEDDDDEEPEGLFEEEGLVVDIYADTPPHLRALAEAAQLGNVDALRHALDNLTGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFTEIVQLLINTADSNCLKRMLDTLDAEGDTPLHHAARGEHVDVVRILLAAGASSTKTNTYGKTPGELSDPETEVRRLLEAAEAC* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01704 200 Gene3D - 36 199 IPR036770 -
Eupl05g01704 200 SMART ANK_2a 104 134 IPR002110 GO:0005515
Eupl05g01704 200 SMART ANK_2a 71 100 IPR002110 GO:0005515
Eupl05g01704 200 SMART ANK_2a 143 172 IPR002110 GO:0005515
Eupl05g01704 200 MobiDBLite consensus disorder prediction 1 20 - -
Eupl05g01704 200 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Eupl05g01704 200 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Eupl05g01704 200 Pfam Ankyrin repeats (3 copies) 38 102 IPR002110 GO:0005515
Eupl05g01704 200 Pfam Ankyrin repeats (3 copies) 104 173 IPR002110 GO:0005515
Eupl05g01704 200 FunFam BRCA1-associated RING domain protein 1 36 200 - -
Eupl05g01704 200 SUPERFAMILY Ankyrin repeat 39 181 IPR036770 -
Eupl05g01704 200 PANTHER SOWAH (DROSOPHILA) HOMOLOG 23 198 - -
Eupl05g01704 200 ProSiteProfiles Ankyrin repeat region circular profile. 143 169 - -
Eupl05g01704 200 ProSiteProfiles Ankyrin repeat profile. 143 175 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01704 10 185 Ion Channels AT2G25600 31.683 3.59e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01704 - - ming:122080979 299.671