Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01668 ATGGGGAGGGCTCCTTGTTGTGACAAGGCAAACGTGAAGAAAGGACCATGGTCACCTGAAGAAGACTTGAAGCTCAAGGAGTTCATAGAAAAATATGGAACTGGTGGGAATTGGATTGCTCTTCCTCAGAAAGCTGGTCTTAAGAGATGTGGGAAGAGTTGCAGATTGAGATGGCTTAATTATCTCAGGCCCAACATAAAACATGGAGAATTCTCTGATGATGAAGATAGGATAATCTGTAGCCTCTTTGCTAGCATTGGAAGCAGGTGGTCAATAATAGCTGCACAGTTGCCAGGGAGGACTGATAATGATATCAAGAACTACTGGAACACAAAACTGAAGAAGAAACTCATGGGGATGGTTCCTTCATCTAGGAGAAAACCTCCTCAACCATCACCATTTCCATCTCCTCTTCAAACAGCTGCAACATCACCATCATCATCATCATACAAATTAGGCAGTAGTAGCAGTCCTTATTACACCCCAACAAAATCTCTTGCAGGTCTTGAACCCCCCATTTCAATCCCTTCAAATCATTTGAACAGTACTACCACTATCATCCAAGAGAGCTTAATGGGTCCCATCCACCAATATCAAGTGACTGACAGTCATGTAATGTTTGGAGGTGAACCAAGTTCCAGTTCTTCTGATGGAAGTTGCAATCAGATCAATAATGGTGCACAGGTGGGTTTGGAGAGTAATTTCTATAATGGGGTTGATGGTTATGGGTGGACTGAAAGACCAAATGATTTGTGGGGCCCACTAGATTATGGTCTTGAGGAGATTAAGCATCTTGTTAGTACTAATAATGGATGTAATAACTTGTTGATTGATGAAAGCAAGACACAAGGGAGAGCCATGTACTACTTCTGA 873 0.4215 MGRAPCCDKANVKKGPWSPEEDLKLKEFIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDDEDRIICSLFASIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGMVPSSRRKPPQPSPFPSPLQTAATSPSSSSYKLGSSSSPYYTPTKSLAGLEPPISIPSNHLNSTTTIIQESLMGPIHQYQVTDSHVMFGGEPSSSSSDGSCNQINNGAQVGLESNFYNGVDGYGWTERPNDLWGPLDYGLEEIKHLVSTNNGCNNLLIDESKTQGRAMYYF* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01668 290 MobiDBLite consensus disorder prediction 120 155 - -
Eupl05g01668 290 Gene3D - 7 68 - -
Eupl05g01668 290 FunFam Transcription factor RAX3 7 68 - -
Eupl05g01668 290 Gene3D - 70 132 - -
Eupl05g01668 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Eupl05g01668 290 CDD SANT 16 62 IPR001005 -
Eupl05g01668 290 SMART sant 13 64 IPR001005 -
Eupl05g01668 290 SMART sant 67 115 IPR001005 -
Eupl05g01668 290 PANTHER OS09G0431300 PROTEIN 1 238 - -
Eupl05g01668 290 FunFam Transcription factor RAX2 70 132 - -
Eupl05g01668 290 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Eupl05g01668 290 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Eupl05g01668 290 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Eupl05g01668 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Eupl05g01668 290 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Eupl05g01668 290 CDD SANT 70 113 IPR001005 -
Eupl05g01668 290 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Eupl05g01668 290 MobiDBLite consensus disorder prediction 139 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01668 Eupl-Chr5 40952001 40954390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01668 1 127 MYB Transcription Factor Family AT5G57620 85.039 4.05e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl05g01668 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01668 K09422 - nnu:104586314 367.466