Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01662 ATGCCACAAGATTCTCCGAAGATAAAGACGGTAGAGCAGTGGAGATGGTCGGAAATGCAGGGGCTCGAGCTTGTGTCGGCTGAGTCTGTTGGGTTTAAAGGAGGAGAAGCAGAAGAAGAATCTCAGATAGAATTGAGAGAAGAAGCTCAAGAGGGAGAGAGAGGAGAAGTTGTCGAGGCTGGTGGTGTGAATCGTGGAGACATGGAGGTTTCTGAGGGAAAGAAGGATGGTGGGGAGAAACCCAGTTCGGTTCTTCCTTCGGCACGATTGGGAGAGCTTTTTAGATTTGCAGATGGGTTGGATTATGTTTTAATGGCGATTGGGACAGTGGGAGCAATTATTCATGGCTGCTCGTTGCCTGTTTTTCTTCGGTTCTTCGCTGATCTTGTGAATTCCTTCGGTTCCAACGCTAACAATGTAGATAAGATGACGCAGGAGGTTTTGAAGTACGCATATTATTTTCTTGTGGTTGGTGCGGCGATTTGGGCATCTTCTTGGGCTGAGATATCATGTTGGATGTGGACGGGAGAGCGGCAATCGACCAAGATGAGGATCAAGTACCTGGAAGCTGCTTTGAACCAGGATGTCCAGTACTTCGATACAGAGGTTCGCACCTCCGATGTCATTTTCGCCATTAACACTGATGCCGTGATGGTCCAAGATGCCATTAGTGAGAAGTTGGGTAATTTTATCCATTACATGGCGACCTTTGTGTCCGGATTCGTGGTGGGTTTTACTGCAGTGTGGCAACTAGCCCTTGTCACGCTCGCCGTAGTTCCTCTCATAGCTGTGATCGGAGGCATCCACACCACTACATTAGCCAAGCTCTCCTCCAAGAGCCAGGAATCTCTCTCAGAAGCAGGAAACATTGCAGAACAGACAATGGTTCAAATCCGGACAGTTTTATCCTTCGTAGGCGAATCAAGAGCATTACAGGCTTACTCCTCGGCATTGAGAGTAGCTCAGAGGATTGGTTACAAGACTGGATTCACAAAAGGGATGGGATTGGGTGCGACGTACTTCACTGTTTTCTGCTGCTATGCGCTGCTGCTCTGGTATGGGGGTTATCTTGTCAGACACCACTACACCAATGGAGGACTCGCCATCGCCACCATGTTCTCTGTTATGTTAGGCGGACTGGCTTTGGGACAATCTGCCCCAAGCATGACCGCCTTCGCTAAGGCAAAAGTTGCAGCTGCAAGGATCTTCCGTATTATCAATCACACACCGAGTATCGACCGGAAAACTGAATCAGGTTTAGAGTTGGATTCAGTTACAGGCCATGTAGAGTTAAAAAATGTAGATTTCTCTTACCCATCAAGGCCAGATGTTCGGATCCTCAGCAACTTCACCCTAGACGTCCCGGCGGGGAAGACCATAGCTTTAGTAGGAAGCAGTGGCTCTGGTAAGAGCACTGTTGTCTCCCTCATTGAGAGATTTTACGATCCCACCTCAGGACAAGTTCTGTTAGATGGACACGACATAAAGACGCTGAAGCTGCGATGGCTGAGGCAACAGATAGGGCTTGTGAGCCAAGAGCCTGCTTTGTTTGCAACCACCATTAAAGAAAACATTCTCTTGGGTAGGCCCGATGCTACCCAAATTGAGATCGAAGAGGCTGCCAGAGTTGCTAACGCTCACTCGTTTATCATAAAGCTTCCCGACGGCTACGACACCCAGGTTGGGGAGAGAGGGTTGCAGCTCTCAGGAGGGCAGAAGCAGAGGATTGCTATAGCAAGAGCAATGCTGAAGAACCCAGCAATTCTGCTTTTGGATGAGGCGACAAGCGCATTGGACTCGGAGTCCGAGAAGCTGGTGCAGGAGGCACTCGATCGGTTCATGATTGGAAGGACAACTCTTGTAATTGCACACCGCCTCTCCACTATCCGCAAGGCTGACCTTGTTGCAGTCCTCCAGCTGGGAAGCGTTTCCGAGATTGGGACCCATGATGACCTGATTGCCAAAGGTGACAATGGCGTCTACGCCAAGCTCATCCGCATGCAGGAGATGGCGCATGAAACCAATCTCAACAATTCCAGAAAGAGTAGTGCAAGGCCTTCTAGTGCCAGAAACTCGGTAAGCTCGCCAATCATTGGTCGGAATTCATCCTATGGCCGGTCACCTTACTCTCGCCGACTCTCTGATTTCTCTACCTCTGACTTTAGCCTCTCCCTCGATGGTGCACACCCGAGTTACCGGCTTGATAAGCTTGCCTTCAAAGAGCAGGCCAGCTCCTTCTGGCGTCTTGCCAAGATGAACTCCCCTGAATGGGCCTACGCCCTGGTTGGCTCTGTTGGTTCTGTTGTGTGCGGCTCCATAAGTGCCCTCTTTGCCTATGTCCTCAGTGCTGTCCTCAGTGTCTACTATAACCAAGACTACGCTTACATGCGTCGAGAGATTGGGAAGTACTGTTACCTTCTGATTGGGGTCTCATCGGCGGCCTTACTTTTCAACACATTGCAGCATTTCTTCTGGGACGTTGTGGGGGAGAATCTTACGAAGCGGGTGAGGGAGAAGATGCTGGCAGCAGTATTGAAAAATGAAATGGCATGGTTCGATAGTGAGGAGAATGAGAGTGGTAGGATTGCAGCAAGGCTGGCGCTCGATGCTAACAATGTCCGATCAGCAATTGGAGACCGGATTTCGGTGATTATGCAGAACTCAGCTCTCATGCTTGTTGCCTGCACTGCAGGGTTTGTCTTGCAGTGGCGCCTTGCCCTCGTCCTCATTGCTGTCTTCCCTGTTGTCGTTGCTGCCACTGTTTTGCAGAAAATGTTCATGAAAGGCTTCTCGGGCGATTTAGAAGCTGCCCATGCCAAGGCCACACAGCTAGCAGGTGAGGCTGTGGCCAATGTCAGAACAGTCGCAGCCTTCAATTCAGAGGCGAAGATTGTCGGCCTCTTCTCTTCCAACCTTCAAACTCCCCTAAGACGCTGCTTCTGGAAGGGACAGATTGCTGGAAGTGGCTTTGGTGTAGCCCAGTTCTTACTCTACGTCTCTTATGCCCTTGGACTATGGTATGCCTCCTGGCTCGTAAAACATGGCATCTCCGATTTCTCAAAGACGATCCGGGTCTTCATGGTCCTAATGGTGTCTGCTAATGGTGCTGCTGAGACACTGACCCTTGCTCCTGATTTCATTAAGGGTGGTCGAGCCATGCGCTCTGTCTTTGATCTATTGGACCGCAAGACTGAAATTGAGCCCGACGATCCAGATGCCACCCCTGCTCCTGACCGCCTGCGAGGGGATGTTGAATTCAAGCATGTTGACTTCAGCTATCCATCTCGCCCTGACATGCCAGTCTTCCGAGACCTCACCCTCCGTGCCCGTGCAGGCAAGACACTCGCCCTCGTAGGACCCAGCGGTTGTGGGAAAAGCTCTGTCATTGCACTTGTGCAGCGTTTCTATGAGCCAACATCTGGACGGGTGCTAATTGATGGGAAGGACATTCGTAAATACAATCTCAAGTCATTACGACGTCACATTGCCATGGTCCCTCAAGAACCATGCCTCTTCGCTGCCACCATACATGACAACATCGCATACGGGCGTGAGTCTGTGACTGAGGCTGAGGTCATTGAGGCTGCCACTCTAGCTAATGCACACAAGTTCATCTCAGCATTGCCTGATGGATATCGCACATGGGTTGGTGAGAGGGGGGTCCAATTGTCTGGTGGGCAGAGGCAGAGGATTGCCATAGCTCGTGCTTTTATAAAGAAAGCCGAAATAATGCTACTTGATGAGGCAACAAGCGCACTTGACGCCGAGTCGGAGAGGTGCGTCCAAGAGGCACTTGAACGTGCTTGTTCAGGACGGACAGTAATTGTCGTTGCACATCGACTATCAACGATTAGGAATGCCCATGTGATTGCCGTGATCGACGATGGGAAGGTGGCAGAGCAAGGTTCCCACTCGCATCTCTTGAAACATTACCCCGATGGGTGTTATGCGCATATGATACAGTTGCAGCGCTTCACGCACGGGCAAGTCATGGGAATGGCGTCAGGCTCGAGTTCTTCCACACGTGCCAGAGAAGATGAGGGGAGTGAGACCAAGTGA 4059 0.5073 MPQDSPKIKTVEQWRWSEMQGLELVSAESVGFKGGEAEEESQIELREEAQEGERGEVVEAGGVNRGDMEVSEGKKDGGEKPSSVLPSARLGELFRFADGLDYVLMAIGTVGAIIHGCSLPVFLRFFADLVNSFGSNANNVDKMTQEVLKYAYYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDVQYFDTEVRTSDVIFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGGIHTTTLAKLSSKSQESLSEAGNIAEQTMVQIRTVLSFVGESRALQAYSSALRVAQRIGYKTGFTKGMGLGATYFTVFCCYALLLWYGGYLVRHHYTNGGLAIATMFSVMLGGLALGQSAPSMTAFAKAKVAAARIFRIINHTPSIDRKTESGLELDSVTGHVELKNVDFSYPSRPDVRILSNFTLDVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDATQIEIEEAARVANAHSFIIKLPDGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQLGSVSEIGTHDDLIAKGDNGVYAKLIRMQEMAHETNLNNSRKSSARPSSARNSVSSPIIGRNSSYGRSPYSRRLSDFSTSDFSLSLDGAHPSYRLDKLAFKEQASSFWRLAKMNSPEWAYALVGSVGSVVCGSISALFAYVLSAVLSVYYNQDYAYMRREIGKYCYLLIGVSSAALLFNTLQHFFWDVVGENLTKRVREKMLAAVLKNEMAWFDSEENESGRIAARLALDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDLEAAHAKATQLAGEAVANVRTVAAFNSEAKIVGLFSSNLQTPLRRCFWKGQIAGSGFGVAQFLLYVSYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPAPDRLRGDVEFKHVDFSYPSRPDMPVFRDLTLRARAGKTLALVGPSGCGKSSVIALVQRFYEPTSGRVLIDGKDIRKYNLKSLRRHIAMVPQEPCLFAATIHDNIAYGRESVTEAEVIEAATLANAHKFISALPDGYRTWVGERGVQLSGGQRQRIAIARAFIKKAEIMLLDEATSALDAESERCVQEALERACSGRTVIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKHYPDGCYAHMIQLQRFTHGQVMGMASGSSSSTRAREDEGSETK* 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01662 1352 PANTHER ABC TRANSPORTER B FAMILY 72 810 IPR039421 -
Eupl05g01662 1352 Gene3D - 1073 1324 IPR027417 -
Eupl05g01662 1352 Gene3D - 419 669 IPR027417 -
Eupl05g01662 1352 MobiDBLite consensus disorder prediction 675 707 - -
Eupl05g01662 1352 SUPERFAMILY ABC transporter transmembrane region 748 1070 IPR036640 GO:0005524|GO:0016020
Eupl05g01662 1352 MobiDBLite consensus disorder prediction 30 83 - -
Eupl05g01662 1352 SMART AAA_5 1111 1303 IPR003593 GO:0016887
Eupl05g01662 1352 SMART AAA_5 456 642 IPR003593 GO:0016887
Eupl05g01662 1352 MobiDBLite consensus disorder prediction 1331 1352 - -
Eupl05g01662 1352 Gene3D ABC transporter type 1, transmembrane domain 740 1049 IPR036640 GO:0005524|GO:0016020
Eupl05g01662 1352 Gene3D ABC transporter type 1, transmembrane domain 1050 1072 IPR036640 GO:0005524|GO:0016020
Eupl05g01662 1352 CDD ABC_MTABC3_MDL1_MDL2 1084 1323 - -
Eupl05g01662 1352 FunFam ABC transporter B family member 1 92 428 - -
Eupl05g01662 1352 SUPERFAMILY ABC transporter transmembrane region 93 413 IPR036640 GO:0005524|GO:0016020
Eupl05g01662 1352 FunFam ABC transporter B family member 1 1074 1324 - -
Eupl05g01662 1352 Pfam ABC transporter 1103 1251 IPR003439 GO:0005524
Eupl05g01662 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 668 IPR027417 -
Eupl05g01662 1352 ProSitePatterns ABC transporters family signature. 568 582 IPR017871 GO:0005524|GO:0016887
Eupl05g01662 1352 FunFam ABC transporter B family member 1 419 669 - -
Eupl05g01662 1352 CDD ABC_6TM_Pgp_ABCB1_D2_like 750 1066 - -
Eupl05g01662 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1076 1323 IPR027417 -
Eupl05g01662 1352 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 106 394 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl05g01662 1352 CDD ABC_MTABC3_MDL1_MDL2 429 668 - -
Eupl05g01662 1352 FunFam ABC transporter B family member 1 740 1049 - -
Eupl05g01662 1352 CDD ABC_6TM_Pgp_ABCB1_D1_like 105 390 - -
Eupl05g01662 1352 FunFam ABC transporter B family member 19 1050 1072 - -
Eupl05g01662 1352 ProSitePatterns ABC transporters family signature. 1223 1237 IPR017871 GO:0005524|GO:0016887
Eupl05g01662 1352 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 761 1048 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl05g01662 1352 Pfam ABC transporter transmembrane region 105 377 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl05g01662 1352 Pfam ABC transporter transmembrane region 765 1031 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl05g01662 1352 Gene3D ABC transporter type 1, transmembrane domain 92 682 IPR036640 GO:0005524|GO:0016020
Eupl05g01662 1352 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1084 1320 IPR003439 GO:0005524
Eupl05g01662 1352 Pfam ABC transporter 447 596 IPR003439 GO:0005524
Eupl05g01662 1352 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 429 665 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01662 Eupl-Chr5 40857347 40864347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01662 92 1347 Calmodulin-binding Proteins AT2G36910 86.714 0.0 2242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01662 K05658 - ming:122057843 2253.02