Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01654 ATGGCTTCGGATGCGAGCAAGAAGAAGGCGGCACAGAAAAAGGCAGCTGCGGCGGCGAAGAGAGGAGGGAAGTCAGCTGCTGCAGCGTCTTCGAAGTCTGCGGCAGCAACCACTTCGCAGAATGGTGGTGGTGTTGGGAATTTAGCGAATGAAATCGGTTCTTTGCAAATATCGGATCGAACATGTACTGGTGTTCTCTGTTCTCATCCACTCTCGAGAGATATCCATATAGAGTCTTTATCTGTTACCTTCCATGGTCATGATCTCATAGTGGATTCTGAACTGGAGCTTAACTATGGCAGGCGGTATGGTTTGCTTGGATTGAATGGCTGTGGGAAGTCTACGCTCCTTACAGCAATAGGGTGTCGAGAGCTCCCCATTCCAGAACACATGGATATCTATCACCTAACCAGGGAGATTGAAGCTTCTGACTTGTCTGCACTTGAGGCTGTCATAAATTGTGATGAGGAGAGGCTGCAATTGGAGAAAGAAGCGGAAGCTTTGGCAGCAGAGGATGGTGGTGGTGGAGATGCCCTGGAACGCATTTATGAGCGGCTGGAAGCCTTAGATGCATCAACTGCTGAGAAGCGTGCAGCTGAGATCTTGTTTGGTCTTGGTTTCGATAAGAAAATGCAAGCAAAGAAAACTCGGGATTTCTCTGGTGGCTGGCGAATGAGGATTGCATTAGCAAGAGCCTTGTTCATGAACCCAACCATCCTTTTGCTTGATGAACCTACAAACCATCTCGATTTAGAAGCTTGTGTCTGGTTGGAGGAGATGTTGAAGAAATTCGACCGCATCTTGGTTGTAGTGTCTCACTCCCAGGACTTCCTGAATGGTGTCTGCACAAACATCATTCACATGCAGAGTAAGAAGCTAAAGCTTTACACAGGTAACTACGACCAGTATGTGCAGACGCGTGCGGAACTTGAAGAGAACCAGATGAAGCAGTACAAGTGGGAGCAGGAGCAGATCTCATCAATGAAGGAGTACATTGCGAGGTTTGGGCATGGGTCTGCAAAGCTGGCTCGCCAGGCACAGAGCAAGGAGAAGACACTGGCAAAGATGGAACGTGGTGGACTAACTGAAAAGGTGGCAAGGGACAAGATTCTGGTCTTCCGCTTCACTGACGTTGGGAACCTTCCCCCGCCAGTTCTCCAGTTTGTGGAGGTCACATTTGGCTACACGACTGATAATCTTCTCTACAAGAACCTTGACTTTGGGGTGGACTTGGACTCAAGAGTAGCACTTGTGGGACCGAATGGAGCTGGGAAAAGCACGCTGCTGAAGCTGATGACGGGGGATCTGATTCCTTCTGATGGCATGGTCCGGCGGCACAACCACCTGAGGATTGCACAATTCCATCAGCACTTGGCTGAGAAGCTTGAAATGGAGATGTCTGCACTCCAGTTCATGATGAGGGAGTATCCTGGCAATGAGGAAGAGAAGATGAGGGCTGCAGTTGGGAAGTTTGGGCTGACAGGCAAAGCGCAAGTGATGCCAATGAAAAACTTATCAGATGGACAGAGAAGCCGGGTGATATTTGCATGGTTGGCATGGAGGCAGCCACACATGCTGTTGCTGGATGAGCCTACGAACCATCTCGACATCGAGACAATTGACTCGCTGGCGGAGGCGCTGAATGAGTGGGACGGTGGCTTGGTTCTTGTTAGTCACGACTTCAGGCTCATCAACCAGGTTGCCCAAGAGATATGGGTGTGTGAAAACCAAACTGTGACCCGATGGGGAGGCGACATTATGGACTTTAAGGAGCACCTCAAGAGCAAGGCTGGTTTATCTGATTGA 1806 0.4967 MASDASKKKAAQKKAAAAAKRGGKSAAAASSKSAAATTSQNGGGVGNLANEIGSLQISDRTCTGVLCSHPLSRDIHIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYHLTREIEASDLSALEAVINCDEERLQLEKEAEALAAEDGGGGDALERIYERLEALDASTAEKRAAEILFGLGFDKKMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEEMLKKFDRILVVVSHSQDFLNGVCTNIIHMQSKKLKLYTGNYDQYVQTRAELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARDKILVFRFTDVGNLPPPVLQFVEVTFGYTTDNLLYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLIPSDGMVRRHNHLRIAQFHQHLAEKLEMEMSALQFMMREYPGNEEEKMRAAVGKFGLTGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAQEIWVCENQTVTRWGGDIMDFKEHLKSKAGLSD* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01654 601 FunFam Abc transporter f family member 1 75 339 - -
Eupl05g01654 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 320 IPR027417 -
Eupl05g01654 601 CDD ABCF_EF-3 75 292 - -
Eupl05g01654 601 CDD ABCF_EF-3 386 578 - -
Eupl05g01654 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 315 IPR003439 GO:0005524
Eupl05g01654 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 584 IPR027417 -
Eupl05g01654 601 MobiDBLite consensus disorder prediction 1 41 - -
Eupl05g01654 601 ProSitePatterns ABC transporters family signature. 219 233 IPR017871 GO:0005524|GO:0016887
Eupl05g01654 601 Pfam ABC transporter 286 363 IPR032781 -
Eupl05g01654 601 Coils Coil 151 171 - -
Eupl05g01654 601 Gene3D - 350 599 IPR027417 -
Eupl05g01654 601 Gene3D - 75 339 IPR027417 -
Eupl05g01654 601 Pfam ABC transporter 402 533 IPR003439 GO:0005524
Eupl05g01654 601 Coils Coil 293 313 - -
Eupl05g01654 601 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 39 596 - -
Eupl05g01654 601 Pfam ABC transporter 93 247 IPR003439 GO:0005524
Eupl05g01654 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 386 601 IPR003439 GO:0005524
Eupl05g01654 601 SMART AAA_5 411 578 IPR003593 GO:0016887
Eupl05g01654 601 SMART AAA_5 99 301 IPR003593 GO:0016887
Eupl05g01654 601 FunFam ATP-binding cassette sub-family F member 3 346 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01654 Eupl-Chr5 40715662 40719386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01654 386 592 Calmodulin-binding Proteins AT2G36910 24.473 4.70e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01654 K06185 - nnu:104586322 1032.32