Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01652 ATGGCTAAGTCTAAAACCAATGGGAGGAAGAAGAATAGCATAGTAAAGCTTAAGATAGTAGTGGAGAAGCTACAAAAGAGTCTTTCCCTTTCTAGGAGATCAGCTTCTGATTTTGACGACTCCGATCAAGAATTCGAAGATGTTGGTAACTCAATGTCAGTGCCAGAAGACGTCAAGGAAGGACACTTTGCGGTGATTGCTGTCGATGATGGCCAGCCTAAGAGGTTTGTCGTCGCATTGAGTTATCTAACTCATCCGCTGTTCCTAAGACTGTTAGAGCAAGCAGCGGAGGAGTTTGGTTTTGATCATGAGGGTGCTCTCACCATACCTTGCCGGTCGAGCGAACTTGAGAGCATACTGGCTGAACAGTGGAAGGAGGAGAGAAATGCTAATGCTGGTGTTGGCTGGGATTCATGGATACAAACTTTTCCACCTGCTCCGATGCTTACTCCTTCGCCACTGTATATGGAAAAGGATTCGCTCTTGCTAGTAGGGATGCTGGCATGCACGCGGTATCTGACTCTGCCCCCCGGGAATGAACGTCGAGCTCGTGAGCTTCCCTCGCTCGAGGTGGTTTGTGCTTAG 585 0.4838 MAKSKTNGRKKNSIVKLKIVVEKLQKSLSLSRRSASDFDDSDQEFEDVGNSMSVPEDVKEGHFAVIAVDDGQPKRFVVALSYLTHPLFLRLLEQAAEEFGFDHEGALTIPCRSSELESILAEQWKEERNANAGVGWDSWIQTFPPAPMLTPSPLYMEKDSLLLVGMLACTRYLTLPPGNERRARELPSLEVVCA* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01652 194 Pfam Auxin responsive protein 40 120 IPR003676 GO:0009733
Eupl05g01652 194 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 119 IPR003676 GO:0009733
Eupl05g01652 194 MobiDBLite consensus disorder prediction 29 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01652 Eupl-Chr5 40699252 40703180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01652 40 120 Calmodulin-binding Proteins AT5G20810 45.679 1.68e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01652 K14488 - vvi:100244862 178.333