Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01640 ATGGCTTCTCTCAGTTCCAGATTGAAGCTTTTCTTGGTGATATTGCTGTGTTCTGTGGACCCATTAGGAGGAACTTCAGATTTCCAAGCATTGACGGCATTTAAATCAGTAGTGGGAGACCCAAAGGCAATCTCCGACTGGGGCATGGGGTCTTCTCCCTGTTCCTGGACAGGGATCAAATGCAGAGATGGCAGTGTTGTATCTCTATCTTTAACTCATTTGGATCTGCAAGGGACTCTTCCTCTGGAGCTGGCATCCTTATTGAATCTTGAATTACTCAATCTTGCCTATAATCAATTTTCGGGTCCAATCCCATCTCAGATATGGAATCTAAAAAAGCTCAAAACCCTTGATCTCAGCTTCAACCTGCTCAGTGGGAGTATTTCTTCTGATATTCAAAACCTCAAAAAGCTCCAAAAGCTAGACCTTAGCTCTAACAGCTTATCAGGCAAACTGGTCCCTGCACTTCGTTCTTGTTCAAGCCTTCAAGTCTTGGATTTAGGTTCGAATTCCTTCACCGGAGAAATCCCAGAGCAGATTTCAGCTCTATCAAAATTAAAGATACTAGTCTTGGGAGGCAATGGACTTTCGGGTCTGATCCCATCAGACATCGTTAACCTTTCGGATCTTCGTGTTCTTGATCTTGGTAATGGCTTCCTCTCTGGTAGCATTCCAAAGAGCATTGGAGAGCTAAAGAGGTTGCATTCCTTGGATCTATCCAACAACTCAATTACAGGAACAATTCCGCTAGGCCTTGGAAAGCTGACTGCACTGAGATATCTTCATTTAGGTCATAACAGGTTTACGGGCCCCTTGCCCTGTGAAATTGGGAATCTCAAGAACTTGGTTAATTTGGATGCGCCTTCTTGCGGTCTCCGAGGTCCAATTCCGGATGAAATTGGCAATCTATGGAGCCTTGAGATGATCGACCTCTCAAGCAACCCGTTACAGTCACCAATCCCCGAATCCATTGGGAAGTTGCAGAACCTTACAATTCTAAGCCTGGTTAGTGCAGGAATCAATGGGTCCATACCAGCAGAGCTTGGGAACTGTCAGAAACTAAAAAGTTTGTTTCTAACATTTAATGATCTTTCTGGAGCACTTCCAGATAACCTTGTGGGCTTGTCGGATTCTATCCTCTCATTCAGCATTGAAAAGAACCGTATTGCAGGGCAGCTTCCATCTTGGTTGGGTGGGTGGCATTCCGCTGAATCAATCCTGTTAGCTTCGAATCAGTTCCATGGCAGTATCCCACCAGAATTCGGCAATTGTTCGTCCCTGACTTACCTCAGCCTCAGTCATAATGAGTTAAGAGGCACCATCCCTGCAGTGCTCTGCAATTGCAAATTCTTATCGGAGCTTGACCTTGAGAACAATCTCCTCACTGGGACGATCGATGGTACCTTCCAAAACTGTAGAAACCTCACCCAACTTGTTCTGTTTCAGAACCAGCTCACTGGGACAATCCCTAGGTATCTGGCCAACCTCCCACTTCTAATTCTTGAACTAGATTACAACAATTTTACTGGTGAAATTCCAGAAGAAATATGGAGATCGAATTCCCTATTGGAGGTCAGCGCCGGCTTCAACTACCTTCAGGGGAGTCTGTCTCCAAATATTGGCAATCTCATCACCCTTCAGCGCCTTGTCTTAAATAATAATAGATTGGAAGGAATAATTCCAAAAGAGATTGGAAACTTGCAGAACCTATTAGTGCTCTCACTAAACCAGAATCAGCTATCTGGGGAGATCCCTCCAGAACTCTTCAAATGCAGGTCCATAACAAGCTTAGATCTTGGAAACAACGAACTCACTGGGAGTATCCCAAGAGACGTGGGGAATCTGACACAGCTGGAATACTTGGTTCTTGCCCACAACAACCTATCTGGTTCTCTCCCCCATGGAATAACACAGGGTTTCAGGCAACCTAAAATCCCTGATACAAGCTATATCCAGCACCGTGGAGTTTTTGATCTCTCCAGGAACAGGCTTTCTGGTCAGATACCTGAACAACTCGGGAACTGCAGTGTGATCGTAGATTTGCTGCTGGGCAACAACAATTTCACCGGTAAAATTCCAAGATCCATTTTCAGACTCCCGAATCTCATTTCCATTGATCTTTCCTTGAACCAACTGGAAGGGAAGATACCAGTTGAGGTTGGAGATGCGAAGAAGCTTCAGGGTATGGTGCTGGCATATAACCGCCTTGAAGGTAACATTCCTTTGGAGATCGGAAAGCTGAAAAATCTGGTTAAACTGAATCTGTCTGGGAACCTCTTGACGGGCGAAATTCCAGCTTCCATCGGCGAACTCCAAGCCCTTTCTGATCTGGACCTCAGCCATAACAAGATCTCTGGTCCTCTACCACCTTCCCTTTCCAAGTTGATTAACATTGTCGGCCTGTACTTGCAACATAATTGGATCTCAGGTGACATTAATGGACTCCTTATGGAGAGTGCTTCATGGCGCCAGATTGAGGCCTTAAACCTGAGCACGAACTTCCTAAATGGTGAAATCCCGAACTCGATTGTGAACCTCTCCTACCTGAATTACCTCGACCTTCATAACAACAGGTTCACTGGCACCATAACCAGATATCTCAGCAACCTCTCGCAGCTTCTATACTTGGACATGTCTGAGAACTTCCTCCACGGGCAAATCCCAAGTGAGTTATGTTACCTTGCTGATTTGAAGTTCTTGAATCTTTCGAGTAATCTGTTACAGGGCCCCGTTCAGGGTTGTGGAAAGTTCACGAGTAGATCATTTCTGAACAACGATGATCTCTGTGGAGCTTTAGTAGAAGAGATTTGCAGAGTGGGACCCAGAGAGCAGAGACGCCGACTTGACTTGCCAGCAATCTTGATTCTATCCTTGAGCACCTCTTTCTCCATCCTCTGCTTGATCTTTGTCTTCATCAAGTGGAAAACCATCTTGCAGGACAGCATGAAGCCCGTCTTGCTAACCTTGGCAAATACCAGAGAGCCCCTGAGCAGTAACAAAGCTGCCACACTGGAGAAGTCTCCGTTGCAGCTAACACTGGCAGACATCCTACGCATCACAAACAATTTCTCCAAATCCAATGTGATTGGTGATGGCGGATCAGGAACTGTGTATAGAGGGGTCCTCCCTAATGGGCGGATGGTTGCAATCAAGAAGCTTGGGAAGGCACGGGACCAGGGAAGCAGAGAATTCCTGGCGGAGATGGAGGCAATAGGGAAAGTGAAACACAAAAACCTGGTGAGATTGCTGGGGTACTGCTCTTCTGCAGATGAGAAGCTTCTGATATATGAGTTCATGGCAAATGGAAGTCTGGAGTTCTGGTTAAGGAACAAAAGTGAGACTGTGGAAGTGTTGGATTGGACCAAAAGGTTGAAAATTGCAATCGGAACAGCAAGAGGGCTTGCTTTTCTGCACCATGGAATTGTTCCTCATGTGATTCATCGGGATGTGAAGGCCAGTAACATACTTTTGGATCATGATTTCGAGCCTCGGGTTTCAGACTTTGGATTGGCAAGGACTGTGAGTGCCTGCGACACCCACGTGACCACTGAAATTGCAGGGACATATGGGTACATTGCGCCGGAATATGGTCAGAGCTGGAGGTCCACGACAAAGGGTGATGTATACAGTTTCGGGGTGATACTGTTGGAGATGGTTACAGGGAAGGAGCCGACGGGTTCAGCTTTTAAGGATGTTGAAGGGGGAAATTTAGTGGGGTGGGTTAGGGAGATGGTCATGATGGGAAAGGGCGTTGAGAGCTTAAATGGAGCGGTTTCTGACAGCGGTAGGTGGGTGGCTCAGATGCTTGAGGTGATTCATCTGGGTATTGTCTGCACCAGTGAGGACCCAATAAAGAGACCATCGATGCTGGAGGTGGTTCGGTATCTTGGACATACTGGGGAGAATAACTAG 3912 0.4627 MASLSSRLKLFLVILLCSVDPLGGTSDFQALTAFKSVVGDPKAISDWGMGSSPCSWTGIKCRDGSVVSLSLTHLDLQGTLPLELASLLNLELLNLAYNQFSGPIPSQIWNLKKLKTLDLSFNLLSGSISSDIQNLKKLQKLDLSSNSLSGKLVPALRSCSSLQVLDLGSNSFTGEIPEQISALSKLKILVLGGNGLSGLIPSDIVNLSDLRVLDLGNGFLSGSIPKSIGELKRLHSLDLSNNSITGTIPLGLGKLTALRYLHLGHNRFTGPLPCEIGNLKNLVNLDAPSCGLRGPIPDEIGNLWSLEMIDLSSNPLQSPIPESIGKLQNLTILSLVSAGINGSIPAELGNCQKLKSLFLTFNDLSGALPDNLVGLSDSILSFSIEKNRIAGQLPSWLGGWHSAESILLASNQFHGSIPPEFGNCSSLTYLSLSHNELRGTIPAVLCNCKFLSELDLENNLLTGTIDGTFQNCRNLTQLVLFQNQLTGTIPRYLANLPLLILELDYNNFTGEIPEEIWRSNSLLEVSAGFNYLQGSLSPNIGNLITLQRLVLNNNRLEGIIPKEIGNLQNLLVLSLNQNQLSGEIPPELFKCRSITSLDLGNNELTGSIPRDVGNLTQLEYLVLAHNNLSGSLPHGITQGFRQPKIPDTSYIQHRGVFDLSRNRLSGQIPEQLGNCSVIVDLLLGNNNFTGKIPRSIFRLPNLISIDLSLNQLEGKIPVEVGDAKKLQGMVLAYNRLEGNIPLEIGKLKNLVKLNLSGNLLTGEIPASIGELQALSDLDLSHNKISGPLPPSLSKLINIVGLYLQHNWISGDINGLLMESASWRQIEALNLSTNFLNGEIPNSIVNLSYLNYLDLHNNRFTGTITRYLSNLSQLLYLDMSENFLHGQIPSELCYLADLKFLNLSSNLLQGPVQGCGKFTSRSFLNNDDLCGALVEEICRVGPREQRRRLDLPAILILSLSTSFSILCLIFVFIKWKTILQDSMKPVLLTLANTREPLSSNKAATLEKSPLQLTLADILRITNNFSKSNVIGDGGSGTVYRGVLPNGRMVAIKKLGKARDQGSREFLAEMEAIGKVKHKNLVRLLGYCSSADEKLLIYEFMANGSLEFWLRNKSETVEVLDWTKRLKIAIGTARGLAFLHHGIVPHVIHRDVKASNILLDHDFEPRVSDFGLARTVSACDTHVTTEIAGTYGYIAPEYGQSWRSTTKGDVYSFGVILLEMVTGKEPTGSAFKDVEGGNLVGWVREMVMMGKGVESLNGAVSDSGRWVAQMLEVIHLGIVCTSEDPIKRPSMLEVVRYLGHTGENN* 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01640 1303 FunFam serine/threonine-protein kinase BRI1-like 2 984 1098 - -
Eupl05g01640 1303 PRINTS Leucine-rich repeat signature 234 247 - -
Eupl05g01640 1303 PRINTS Leucine-rich repeat signature 771 784 - -
Eupl05g01640 1303 SUPERFAMILY L domain-like 432 635 - -
Eupl05g01640 1303 CDD STKc_IRAK 1029 1296 - -
Eupl05g01640 1303 SMART LRR_typ_2 771 795 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 699 723 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 231 255 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 870 894 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 747 769 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 111 134 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 424 448 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 303 327 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 615 639 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 543 566 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 135 159 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 567 591 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 183 207 IPR003591 -
Eupl05g01640 1303 SMART LRR_typ_2 87 110 IPR003591 -
Eupl05g01640 1303 ProSiteProfiles Protein kinase domain profile. 1023 1301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01640 1303 SUPERFAMILY L domain-like 654 924 - -
Eupl05g01640 1303 Gene3D Ribonuclease Inhibitor 26 174 IPR032675 -
Eupl05g01640 1303 Gene3D Ribonuclease Inhibitor 273 373 IPR032675 -
Eupl05g01640 1303 Gene3D Transferase(Phosphotransferase) domain 1 1099 1302 - -
Eupl05g01640 1303 SMART serkin_6 1023 1296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01640 1303 SUPERFAMILY RNI-like 153 495 - -
Eupl05g01640 1303 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 652 940 - -
Eupl05g01640 1303 Pfam Protein kinase domain 1024 1293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01640 1303 FunFam Leucine-rich repeat receptor-like protein kinase TDR 376 651 - -
Eupl05g01640 1303 FunFam leucine-rich repeat receptor protein kinase EMS1 234 375 - -
Eupl05g01640 1303 SUPERFAMILY Protein kinase-like (PK-like) 1001 1296 IPR011009 -
Eupl05g01640 1303 Pfam Leucine Rich Repeat 113 135 IPR001611 GO:0005515
Eupl05g01640 1303 Pfam Leucine Rich Repeat 137 159 IPR001611 GO:0005515
Eupl05g01640 1303 Pfam Leucine Rich Repeat 749 771 IPR001611 GO:0005515
Eupl05g01640 1303 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 700 1296 - -
Eupl05g01640 1303 ProSitePatterns Protein kinases ATP-binding region signature. 1029 1052 IPR017441 GO:0005524
Eupl05g01640 1303 Gene3D Phosphorylase Kinase; domain 1 987 1098 - -
Eupl05g01640 1303 FunFam Leucine-rich repeat receptor-like kinase 26 138 - -
Eupl05g01640 1303 Gene3D Ribonuclease Inhibitor 643 939 IPR032675 -
Eupl05g01640 1303 Gene3D Ribonuclease Inhibitor 374 521 IPR032675 -
Eupl05g01640 1303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1145 1157 IPR008271 GO:0004672|GO:0006468
Eupl05g01640 1303 SUPERFAMILY L domain-like 76 177 - -
Eupl05g01640 1303 Gene3D Ribonuclease Inhibitor 175 272 IPR032675 -
Eupl05g01640 1303 Gene3D Ribonuclease Inhibitor 522 642 IPR032675 -
Eupl05g01640 1303 SMART LRR_sd22_2 771 800 - -
Eupl05g01640 1303 SMART LRR_sd22_2 111 134 - -
Eupl05g01640 1303 SMART LRR_sd22_2 846 872 - -
Eupl05g01640 1303 SMART LRR_sd22_2 231 252 - -
Eupl05g01640 1303 SMART LRR_sd22_2 183 209 - -
Eupl05g01640 1303 SMART LRR_sd22_2 567 599 - -
Eupl05g01640 1303 SMART LRR_sd22_2 255 287 - -
Eupl05g01640 1303 SMART LRR_sd22_2 135 164 - -
Eupl05g01640 1303 FunFam Leucine-rich repeat receptor protein kinase EMS1 152 233 - -
Eupl05g01640 1303 Pfam Leucine rich repeat N-terminal domain 26 61 IPR013210 -
Eupl05g01640 1303 FunFam Leucine-rich repeat receptor-like protein kinase 1099 1303 - -
Eupl05g01640 1303 Pfam Leucine rich repeat 210 268 IPR001611 GO:0005515
Eupl05g01640 1303 Pfam Leucine rich repeat 451 508 IPR001611 GO:0005515
Eupl05g01640 1303 Pfam Leucine rich repeat 583 628 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01640 Eupl-Chr5 40457284 40462457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01640 25 789 Receptor kinase-like Gene Family AT5G07280 38.028 6.87e-117 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Eupl05g01640 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01640 - - nnu:104595077 1888.23