Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01633 ATGGGTTCAGAGCTGATTCTCTGCAACACATCGTCTTCTGATCAACCAAACCCGATTTCTGCAATTAAACCCGATTCCTCAAAAACTGAACTCGCTCTCCCTCGCAAAGCCTCCTCTTCAAGGGACCGACATACCAAGGTTAATGGCCGAGGCCGCCGAGTCCGTATTCCTGCCGTGTGCGCTGCTCGAATCTTTCAACTCACTCGCGAGCTCGGTCATCGTTCCGATGGGGAGACCATAGAGTGGCTGCTCCGCCAAGCTGAGCCGTCCATCATCGCTGCCACCGGTACTGGAACTGTCCCCGCCGCCACCCCTGTCACCACTACAGGTCCGATCCCTCCTTCATCATCTCCGCCATCATCTTCCTCTGCTTCTACGACTTCTTGTAGGGCCCTACCCGTTGAAGTGGCGAACGATAACCGGATTTCGGGCGGGTTCTTGGCGGGTTCGAGTTTTGAATCCGGGCCACCGATCTGCCGGCTCGATTTGTGCCAGCCCGTTGGATTTGAATTCTCCAGTGGTAATGGATTCCGGCACATGCCTTTCACGGCGATGTTGCTGCAGCCGGCGACGGACGACGGGGAGGATCAGCAGCAACAACATCAACAACAGGTTCTTAACTCTTGA 627 0.5566 MGSELILCNTSSSDQPNPISAIKPDSSKTELALPRKASSSRDRHTKVNGRGRRVRIPAVCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAATPVTTTGPIPPSSSPPSSSSASTTSCRALPVEVANDNRISGGFLAGSSFESGPPICRLDLCQPVGFEFSSGNGFRHMPFTAMLLQPATDDGEDQQQQHQQQVLNS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01633 208 Pfam TCP family transcription factor 39 138 IPR017887 -
Eupl05g01633 208 ProSiteProfiles TCP domain profile. 40 94 IPR017887 -
Eupl05g01633 208 MobiDBLite consensus disorder prediction 1 50 - -
Eupl05g01633 208 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 133 IPR005333 GO:0003700
Eupl05g01633 208 MobiDBLite consensus disorder prediction 98 128 - -
Eupl05g01633 208 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01633 Eupl-Chr5 40360473 40361451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01633 40 191 TCP Transcription Factor Family AT2G37000 50.658 3.50e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl05g01633 TCP 5.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01633 - - nnu:104586352 199.904